Gene Nther_1858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1858 
Symbol 
ID6315200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1945017 
End bp1945706 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content38% 
IMG OID642644236 
Productcopper amine oxidase domain protein 
Protein accessionYP_001918018 
Protein GI188586473 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.164538 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGATAATA TTAAAATTAT ACTAAACAAC AAGAGGGAAA AAACAGTTTT TACTCAGTTC 
GGTTTTTTTA GCTTATTGTT TGTCATATTT TTTAGTTTAG GATTAGTTTT GACAATTCAA
CACCCTTCAT CTGTCTCTGC TGATGACGAT AGTGATCAGC AGTATGAAAG AATTGATGAT
CTGAAAGTAA CAGTTAACGA AAAAGAAATA AAGTTGCAGA ATGATATCAA AGTGCAAGAT
GGACGAATTT TAATGCCGGC CCGGTCGGTT TTTGAAGCTA TCGGTGCAAC TATGGAATGG
GACGGCGATA AACAAGTTGC TTATGCCCAA AGAAATAAAG ACAGGGTGGC ATTGCCAATA
GGCGAGGATG TAGCAATAAT TAATGGGGAT AGAACAAACC TAGATGTTTC CTCACGGCTG
ATAAAAGGGC GTACATACAT ACCCTTTAGA TTTACTGGTG AGGCCTTTGG TGGTTACGTA
GAGTATGACG GGGAAGAGGG AATTGTTGAT GTCATACTCC CCGATGAGGA ACAACAAACA
AATAAACAAG AATCGGCAGG AGAATCAAAC CACAATAAAG AATTTGATGA AAGCGAATTC
AAAGAAAACG AACAAGAAAA TAATTTTCCT TTAGATTTCC CTGAAAGTCC TGAACACCCT
GATCCTCCTG AAACTCCTAA TCAAGATTAA
 
Protein sequence
MDNIKIILNN KREKTVFTQF GFFSLLFVIF FSLGLVLTIQ HPSSVSADDD SDQQYERIDD 
LKVTVNEKEI KLQNDIKVQD GRILMPARSV FEAIGATMEW DGDKQVAYAQ RNKDRVALPI
GEDVAIINGD RTNLDVSSRL IKGRTYIPFR FTGEAFGGYV EYDGEEGIVD VILPDEEQQT
NKQESAGESN HNKEFDESEF KENEQENNFP LDFPESPEHP DPPETPNQD