Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_1855 |
Symbol | |
ID | 6315291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | - |
Start bp | 1937202 |
End bp | 1941050 |
Gene Length | 3849 bp |
Protein Length | 1282 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642644233 |
Product | recombination helicase AddA |
Protein accession | YP_001918015 |
Protein GI | 188586470 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
TIGRFAM ID | [TIGR02785] recombination helicase AddA, Firmicutes type |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.0546193 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTCAAG AAAATAACAA TACCCAGTCT AAATGGACGG ATAGTCAGAG ACAGGTAATT GATGAAAACT ATCATCATAT CTTAGTTTCT GCTGGTGCAG GGGCAGGAAA AACGGCAGTA CTAGTGCAGA GGATTATTTC CAAGCTCATT GACCCCCATG ATGATTTAAC AGTTAATGGC TTGTTAGTAG TTACTTTTAC AGAAAAAGCT GCTAATGAGA TGCGTGATCG AATAGCCAGA GAACTGAAAA AGGCTTTATC GCAAGATCCA GAAAATGATC ACTTGAAAAA ACAACTATAT CTATTGAATA AAGCTAATAT TTCAACTCTG CATTCATTTT GCCTGGAAAT ACTGCGCCAC TACTTTTATT ATTTAGATAT TGACCCTGCG TTTTCAGTGG CTAGTGAATA TGATGTAGAA TTACTTAGAC AAAGTGTCAT TGATAATTAT TTAGAAGAAG AATATGGCTT GGGCGAACAA TCGTTTTACC TTTTAGTAGA CTCTTATGGC GGCGATAAAA ATGATGAAAA GCTAAAGAAA ATGATATTAA CTTTACATAG ATTTTCTAGA AGTCATCCTC GGCCGAGGAA ATGGTTACAA AGTGTCAAAG ACCATTTTGA GGTCTCAACT GATGATGATT TGACAAACAC TGTGTACTAT CTCGAAATAC AAAAAGATAT CGAAACCCTT TTTAAACAAT GTATTAATTA CTTTAAAAGA GCTTTGCAAA CAAGTGAACA GCCGGGAGGC CCCTATCAAT ACGCCGAAAC TTTATTAGAA GAGATAGAAC AAGTTCAGAA TTTTACTCAA CAGTTAGTAG AGGTTGAGAA CCACAGTTTT GATTGGAATT CATTTGCTGA GCGGGTTGCT GGTTTTAAGT TTTCAAAACT ACCTTCTGTA TCCAAAAATG ACGATGTTGA CGAAGATCTT AAAAAAGATT GTAAAAAACT TAGGGATCAT GGTAAAAAAA CTTTTCAAAA GTTGGTCCAA AATTATTTTA CTAGATCAAA AGATGAACTA TTACGCGATC TACAGCAGTT ATCTCCATTG ATGAATAAGT TGATAGATAT GGTTATAAAT ATGGATGATA AATATGAGGA AGTTAAAAAG CAACGAGGAA TTATGGATTT TTCTGACTTA GAACATTATG TTTATGAATT ACTAGATCAG TACCCAGAAA TAGTATCTGA ACTGCATCAG CGCTATGATG AAGTGATGGT AGATGAATAC CAGGACATTA ATCAAGTTCA AAATGCAATT TTAGAAAAAT TAACTGGACA ACAAAGTATA AGCCCTGACT TGTTCATGGT GGGAGATGTA AAACAGAGCA TTTACAGGTT TAGATTAGCA GAACCTGAAC TGTTTTTAAA CAAGTATGAT ACCTTTGATC AAAGATCAGA AGAAGGTAGT TTAATTGAAT TACAAGAAAA CTTCCGATCT TCTCCCATGG TTCTTGAAAG TGTTAATTAT TTATTCAGTC GGATTATGAC TGGCTCCTTA TCGGGAATTG AGTATAATGA GAAAGTCAAG TTAATTCCCG CCAGTAAACC TAGAGAGCTA TACTTAAATG AAGATGATAA TGAAGATGAT AAATATGAAG GACAAGCAGA AAATGAAAAT CAGGTTATTG ATGGTAGGAC GGAAGTACAT CTTTTGGAAA ACAAGGATAC AAACTCTCGA GAGGAAGATA CAGAGAGGGA AGCCCAGTTG ATTGCTACTA CTATTAATAG CTTGGTAGAA GAAGAGTATC GAATATATGA CCGGGATTTA GACGACTATA GGAAACTTGA TTATAGTGAT TTTGTTATAC TATCACGAAA GACAAAAGAA CAAGCGGAGT TAGTTACTAA TGTTTTCCAG GAACATGGAG TTCCTTTATA CGCAGAACTT GATACAGGTT ATTTTGCTGC TCAAGAAGTA CAAGTAATGC TATCTTTGTT AAAAATTATT GATAATCCTC GTCAGGATAT TCCCTTGGCT GGTGTATTGA GATCCCCCTT GGTAGGTTTA GATAGTAATG AACTAGTTGA AATCAGACGA TCTAACCCTG GAACGGATTA TTATGAAGCA TGTAAGCGAG TTTTAACAAA TTCTATTGAA CAACAGAATC AATGCTCTGA AAAAACAATT CAAAAAATGC AGAAGTTTTT CAGCCAGTTG GAGAGATGGC GTAGAATTTC GAGAGAAAGA AGCCTGGCAG AGTTGATCTG GGATATCTAC CAAATTACGG ATTATCTCGA TTATGTCGCA GGTTTTCCAG GTGGTAGAGA GAGACAGGCT AATCTGTGGA GTTTTTATGA TAGAGCTTTG CAATTTGATT CCTTTTCACA CTCAGGTCTA GTAAAGTTTT TGAATTTTAT AGAAAAACTA GTAGAGCAAG ATTTTGATCT GGGAAAAGCC AGGACTGTTA GTGAAAATGA AAATGTAGTT CGCTTAATGA GTATTCATAA AAGCAAAGGA CTGGAGTTCC CCGTAGTTTT TGTCATGGGT TTGGGTAATA ACTTTAATTT TAATGATCAA AAGGGAGATC TTCTCCTACA TAAAGATCTG GGATTAGGGC CTAAATTGGT TGATCTTACA AACAGGATAA AGTACCCTAC CATTGCTCAT CAAGCAATTA AAGGCTCCTT AGGCCGAGAA ACCTTAGCCG AAGAAATGAG AATACTATAC GTGGCCATGA CCAGGGCGGA AGAAAAATTG TTCTTAGTAG GTTCAGGCAA AGATATTGAA AGTAAAATTT CAGTTCCAGA AGAACCTGCT GCAGCACAGA ACTATTTAGA CTGGATTTAT CCACAGTTAG GAGAAGACTC TGAACTGTTT CACAAAATTT GGAATGATAT TCCTGGCCAA CAGGATGGTA AATCTGTTGA ATACAATTGG AAATCCTATT TTGAAAGCTT GCTATCTCAA ACTTTTACGT GGGAAGTGGA TCAGGAAGAA TTTGAAGATC AAAAACGAAC ACTGGAACAG GCTATTTCTT ATAGCTATCC ATATAATATT GCTACAGAAA TAGTAGGGAA AATGTCTGTG ACCGACTTGG CTAAATCCGA CACTTATATA GACTCAAAGA TAGTCAGTCA AAATCAATCT CTATCTTCTG TTCAGGATCA TTATAAAAAG TTGGCTGCAA CTCAAATTCC AATGTTTTTA GAAACAACTG AAGATGCCGG TGATAATAAA TATGAATCAT ACAAGGAGCA TCATACACCA TCTAAAAGGC CTGAGTTCTT AAAATCCAAT TCCGGGTTAA CTGGAGCCGA AGCGGGTACA AGTATTCACT TGGCATTTCA GCATTTACCT ATTAATTCTG ATTTAAACAG CCAGGAGTTT AGTGAAGAAC AAATAAGTAA TCAGTTAGAC GATCTAGTCA ATAAAGAAAT TATCACTCAG GCTCAGCGAG ACGTCATTTC AGAGGATTTA ATTATGAAGT TTTTCCAAAG TGAATTAGGG CAAGCTATCC TTGAAAGACC TAAAGGACTT AAAAGGGAAC TTCCTTTTAC CTTAGGTGTG CCTGCTTGGG AAATGTTAGC TGGATCTGAA GAATGTCAAG CAGAGCTTGA AGCGGAAAAC ATTGAAACAA CAGAACTACA AGGTTTGTCT GATGAAACAG TAGTTATCCA GGGAGTTATC GATTATCTGT TTTGGGATGG AACAAATTAT TACTTAATAG ATTTTAAAAC AGATAAATTA AATACAAGCA ATATGGATGA AATTGAAAAA CGGTTACAGG GAAAATATCG CATGCAAATT CAAATGTATC TCAGGGCAAT TACCGAAATA TTTAATATAA CTCCAACAAA AGCTTATCTC TATCATGTGC CCACTGGGAA TTGGATACAA GTAGAATAA
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Protein sequence | MVQENNNTQS KWTDSQRQVI DENYHHILVS AGAGAGKTAV LVQRIISKLI DPHDDLTVNG LLVVTFTEKA ANEMRDRIAR ELKKALSQDP ENDHLKKQLY LLNKANISTL HSFCLEILRH YFYYLDIDPA FSVASEYDVE LLRQSVIDNY LEEEYGLGEQ SFYLLVDSYG GDKNDEKLKK MILTLHRFSR SHPRPRKWLQ SVKDHFEVST DDDLTNTVYY LEIQKDIETL FKQCINYFKR ALQTSEQPGG PYQYAETLLE EIEQVQNFTQ QLVEVENHSF DWNSFAERVA GFKFSKLPSV SKNDDVDEDL KKDCKKLRDH GKKTFQKLVQ NYFTRSKDEL LRDLQQLSPL MNKLIDMVIN MDDKYEEVKK QRGIMDFSDL EHYVYELLDQ YPEIVSELHQ RYDEVMVDEY QDINQVQNAI LEKLTGQQSI SPDLFMVGDV KQSIYRFRLA EPELFLNKYD TFDQRSEEGS LIELQENFRS SPMVLESVNY LFSRIMTGSL SGIEYNEKVK LIPASKPREL YLNEDDNEDD KYEGQAENEN QVIDGRTEVH LLENKDTNSR EEDTEREAQL IATTINSLVE EEYRIYDRDL DDYRKLDYSD FVILSRKTKE QAELVTNVFQ EHGVPLYAEL DTGYFAAQEV QVMLSLLKII DNPRQDIPLA GVLRSPLVGL DSNELVEIRR SNPGTDYYEA CKRVLTNSIE QQNQCSEKTI QKMQKFFSQL ERWRRISRER SLAELIWDIY QITDYLDYVA GFPGGRERQA NLWSFYDRAL QFDSFSHSGL VKFLNFIEKL VEQDFDLGKA RTVSENENVV RLMSIHKSKG LEFPVVFVMG LGNNFNFNDQ KGDLLLHKDL GLGPKLVDLT NRIKYPTIAH QAIKGSLGRE TLAEEMRILY VAMTRAEEKL FLVGSGKDIE SKISVPEEPA AAQNYLDWIY PQLGEDSELF HKIWNDIPGQ QDGKSVEYNW KSYFESLLSQ TFTWEVDQEE FEDQKRTLEQ AISYSYPYNI ATEIVGKMSV TDLAKSDTYI DSKIVSQNQS LSSVQDHYKK LAATQIPMFL ETTEDAGDNK YESYKEHHTP SKRPEFLKSN SGLTGAEAGT SIHLAFQHLP INSDLNSQEF SEEQISNQLD DLVNKEIITQ AQRDVISEDL IMKFFQSELG QAILERPKGL KRELPFTLGV PAWEMLAGSE ECQAELEAEN IETTELQGLS DETVVIQGVI DYLFWDGTNY YLIDFKTDKL NTSNMDEIEK RLQGKYRMQI QMYLRAITEI FNITPTKAYL YHVPTGNWIQ VE
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