Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_1805 |
Symbol | |
ID | 6316375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 1869276 |
End bp | 1870208 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642644179 |
Product | amidohydrolase 2 |
Protein accession | YP_001917965 |
Protein GI | 188586420 |
COG category | [R] General function prediction only |
COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000000310667 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.00134282 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCAGAAC AAGTTGAGAT GCCTGATTTT CCTGTTATAG ATTTTCACAT TCATCTACCT GTACAACGAA AAAAACCAAA TAAGTCACGA TCAAGTCACC CAGCTATACA AAATCATAGA AAGAAATTAC AAGAAAAATT TTTTGAGAAA TGGGGATTTG ATAAACCTAA TGGTGAAGTC TACAGTCCTG AGAAGGTTGC AGAGCTTTGG TACAAAGAAA AAGAATATTA TGGTCTAGAA AAAGTTAATG CCGTTACAGC AGGTTTTGAT AATGATACTT TAGCAAATAT AATTAGCTTA TATCCCGAAT CTTTTATTGG TTTTACACAT CACGATATTC AAGAATCTAA TTCATTTGAG GAATTACAAC GGGGCATAGA AGAATTGGGA TTATCGGGTC ATAAAATGTT AGCACCATTT ATGGAACGTC CCTTTAACGA CCCCGAATTT GAACCTTTTT GGAAATATCT TAATGATAAT AAACTGCCAG TGATAATTCA CTTTGGAATT GTTGGAGGCC CCGGCGGTTT AGCCACTTAT AAATATATAA ATCCCTTTTC AATTTTTGAA GTAGCCCGTT CATATCCCGA TATTCCAATA ATCATTCCTC ATTTTGGAGC AGGCTATTTC CAAGAAGTGC TCCACCTAGC TTGGAGCCTT CCCAATATTT ACGTTGATTC ATCTGGATCC AATCAATGGC TTGACTGGAT GGTTTATGAC ATGAGTTTAA AAGACGTATT CAAAAAGTCA TTAAAAACTC TAGGGCCAGA AAGAATGATT TTTGGAACAG ATTCTAGTTG GTTCCCAAGA GGATTTAGCT ATAAATACCT AAAAGTCCAA TGGAAAATTC TAGAGGACCT TGGTGTCAGT AAAAAAGACC AAGAACTCTT TTTCTCTGGA AATGCTAACA GGCTTTTAAA TAACTCACTT TAG
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Protein sequence | MSEQVEMPDF PVIDFHIHLP VQRKKPNKSR SSHPAIQNHR KKLQEKFFEK WGFDKPNGEV YSPEKVAELW YKEKEYYGLE KVNAVTAGFD NDTLANIISL YPESFIGFTH HDIQESNSFE ELQRGIEELG LSGHKMLAPF MERPFNDPEF EPFWKYLNDN KLPVIIHFGI VGGPGGLATY KYINPFSIFE VARSYPDIPI IIPHFGAGYF QEVLHLAWSL PNIYVDSSGS NQWLDWMVYD MSLKDVFKKS LKTLGPERMI FGTDSSWFPR GFSYKYLKVQ WKILEDLGVS KKDQELFFSG NANRLLNNSL
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