Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_1780 |
Symbol | |
ID | 6316428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | - |
Start bp | 1845832 |
End bp | 1848468 |
Gene Length | 2637 bp |
Protein Length | 878 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642644154 |
Product | alanyl-tRNA synthetase |
Protein accession | YP_001917940 |
Protein GI | 188586395 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0013] Alanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.0561709 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAACCC ATGAGATTAG AAAGAAATTT CTGGAGTTTT TTGAAACAAA AGATCACTAT GTGAGGAAAA GTTATTCGAT AATTCCCGAA AATGATCCTA GTATTTTACT AATTGGAGCT GGTATGGCAC CTTTAAAACC GTATTTTACT GGCGAAAAAA CTCCACCATC CCCTAGAATG GCAACTAGCC AAAAATGTGT TAGAACACCG GATATTGAAG AGGTTGGAAT TACAGCTCGT CATGCTACTT TTTTTGAAAT GCTAGGTAAC TTTTCCTTCG GAGATTATTT TAAAAGAGAA GCGATATTCT GGGGATATGA ATTTTGTACT GAATGGCTAA GTCTATCTCC GGAAAAATTA TGGGCTAGTG TATACCTGGA TGATGACGAA GCATACGATA TATGGCATGA CGAAGTGGGG ATACCTCATG AACGAATAGT GAGATTAGGT AAAGAAGATA ACTTTTGGGA AATAGGAACA GGGCCGTGTG GTCCATGTTC TGAAATTCAT TACGATCGAG GTGCTGAATA CGGATGTGAT TCTCCTGATT GTAAACCAGG TTGCGATTGT GATCGTTATT TAGAAATTTG GAATCTGGTT TTTACCCAGT TCAACAGAGA TGAAGAAGGT AACTACACAA CATTAAAACA AAAAAACATT GATACAGGAG CAGGTTTAGA GAGATTGGCC GTTTTATTAC AGGACGTTCC TTCCATTTAC GAAATAGATA TAATTAAGCC TATCTTAGAT CATGTTATCC AGTTGAGTGG AGTTAATTAT GGAGAGGATA ATGACAAAGA TATTTCATTA AGAATAATTA CTGAACATTT ACGAAGTGTT ACTTTCATCG TTGGTGATGG TGTGTTACCT GCTAATGAAG GTAGAGGATA TGTTTTAAGA AGAATCTTAA GAAGAGCTAG CCGTCATGGC AAATTATTGG GAATAAAAGA TACATTTATG AGTGATGGAG TTGATCTGGT AATAGACATT ATGAAAGAAG CTTATCCTGA GCTAGAAGAA CGTAGAGAAT ACATCAAAAA AATTGTTGAG ATCGAGGAAG ACCGTTTTAA TAAAACAGTT GATCAAGGAT TAGGTATTTT GAATGAATTC TTGGAGAATA TGAACAAACA AGGCAAGAAC ACCTTAGAGG GATCAGATGC TTTTAAATTA TATGATACAT ACGGATTTCC TCTTGAATTA ACTAGAGAAA TAGTGCAAGA AAACGGTTAT ACTTTAGATG AACAAGGCTT TCAGGAAGAA CTTAATAGAC AGAGAGAACA GGCAAGAAAG GCTCAACAGG AATCAGAAGG TATGCTAACT GAATCAAATG CTATGAAGCA ATTTCAGGAC CAAAAAGTTG AATTTACTGG CTATGATAAT CTAGAACAAG AGTCACAAAT TATCGGGATT ATAGATCACA AAAATGATGA CTTACTTAAA GAGGTACAAG AAGGAGAAGA AGTTCAAATT TTGATCAATC CTACACCCTT TTACGGTGAA AGTGGTGGTC AAATAGGTGA CACAGGGGAA ATCTTTTCAG ATAATGGTAG AGCTCATGTT AAGAATAGCT CTGTAAACGG GTATGACCAA ACAGTTTTAC AAGTGAAAGT GACTGATGGA CAGCTTCGTA CTGGTGACAA GGTCAGTGGT AAAGTTGATT ATCAACGGCG AAAAGATATA ATGAAAAACC ACAGTGCGAC TCATATGTTG CATTATGCTC TTAAAAAAGT CGTAGGAGCC CATGTGGAAC AGGCTGGTTC TTTAGTGGCT CCAGATCGTT TAAGATTTGA TTTTACTCAT TTTGCTCCTT TATCTGAAGA TGAAATCAAA CAGATTGAAC TTGAGGTTAA TAAATTAATT AGAGAAAATT CCAGAGTTAG AGTGATAAAT ACCGACTTGG AAGAAGCTAA AGAATTAGGC GCTGTTGCCC TATTTGAAGA TAAATATGAG CAAGAAGTAC GAGTGATTGA AATAGGACCT GCCGTTGAAC TATGTGGAGG TACTCATGCA ACAGCCACAG GTGAGCTAGG TTTATTTAAA ATTGATAATC AAACCAGTGT GGGTGCGGGA GTCAGAAGGT TGGAGGCCTT AACCGGCCAA CACGCCCTTG AATATTTGGA TCAAAAAGCA GAGCAGATTC AAGATATTGC TGAACTATTA AAAACAGAAG AAAACAAAGT AGTTGAAAAA ACCCAAGAGT TCCTAGAAGA TTTTAAAGCA AAAGACAAGG AAATAGAAAA ACTAAAAAAT CAAATATTTA CCTTTAAAGT CGATGATTTA TTAGCTCAAA GTAAAGATAT ATCTGATTTT AAACTTGTTG CTAACCAGTT AAATGATTTT GATGCAGATA GTCTGAGAGA TTTATCTGAA CGCGTAAAAA ATAAACTTGA CAGTGGTGTG GTAGTATTAG GAAGTTCTAC AAACAACAAA GCGTTATTTG TAGCAATGGT CACTAAAGAC CTTGTTGAAA AAGGTGTTCA TGCTGGGAAT ATAGTTAAAG AAGTAGCTAA GATAACAGGG GGCGGTGGTG GAGGCCGTCC AGATATGGCA CAAGCAGGTG GTAAAGAACC TGATAAGCTC AATGAAGCAA TTATGAAAGT AGAAACTTTA GTTAGAAACC AACTTAGTCA TAGCTAA
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Protein sequence | MRTHEIRKKF LEFFETKDHY VRKSYSIIPE NDPSILLIGA GMAPLKPYFT GEKTPPSPRM ATSQKCVRTP DIEEVGITAR HATFFEMLGN FSFGDYFKRE AIFWGYEFCT EWLSLSPEKL WASVYLDDDE AYDIWHDEVG IPHERIVRLG KEDNFWEIGT GPCGPCSEIH YDRGAEYGCD SPDCKPGCDC DRYLEIWNLV FTQFNRDEEG NYTTLKQKNI DTGAGLERLA VLLQDVPSIY EIDIIKPILD HVIQLSGVNY GEDNDKDISL RIITEHLRSV TFIVGDGVLP ANEGRGYVLR RILRRASRHG KLLGIKDTFM SDGVDLVIDI MKEAYPELEE RREYIKKIVE IEEDRFNKTV DQGLGILNEF LENMNKQGKN TLEGSDAFKL YDTYGFPLEL TREIVQENGY TLDEQGFQEE LNRQREQARK AQQESEGMLT ESNAMKQFQD QKVEFTGYDN LEQESQIIGI IDHKNDDLLK EVQEGEEVQI LINPTPFYGE SGGQIGDTGE IFSDNGRAHV KNSSVNGYDQ TVLQVKVTDG QLRTGDKVSG KVDYQRRKDI MKNHSATHML HYALKKVVGA HVEQAGSLVA PDRLRFDFTH FAPLSEDEIK QIELEVNKLI RENSRVRVIN TDLEEAKELG AVALFEDKYE QEVRVIEIGP AVELCGGTHA TATGELGLFK IDNQTSVGAG VRRLEALTGQ HALEYLDQKA EQIQDIAELL KTEENKVVEK TQEFLEDFKA KDKEIEKLKN QIFTFKVDDL LAQSKDISDF KLVANQLNDF DADSLRDLSE RVKNKLDSGV VVLGSSTNNK ALFVAMVTKD LVEKGVHAGN IVKEVAKITG GGGGGRPDMA QAGGKEPDKL NEAIMKVETL VRNQLSHS
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