Gene Nther_1778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1778 
Symbol 
ID6316426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1844941 
End bp1845366 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content36% 
IMG OID642644152 
ProductHolliday junction resolvase YqgF 
Protein accessionYP_001917938 
Protein GI188586393 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.140554 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATTA TGGGTTTTGA CCTTGGCGAA GCTACAATAG GAGTGGCGGT AAGTGATGCG 
TTACAACTAA CTGCCCAAGG GAAGACAGTT ATCAAAAGAC AATCTTTAGA AAAAGATATT
GAACAAGTTA CTAAGTTGAT AGAAGACTAT CAAGTGAGTA AGTTGATAGT TGGACTACCC
AAGAATATGA ATGGGAGTTT GGGACAAATG GCTGATCAGA TAATGGATTT TATTAAATCT
CTTGAACAAG AAGTTGACAT CCCTATTGAA ACCGTAGATG AAAGGTTAAC TTCTCGCATG
GCCGAGCAGA CATTGTTAGA AGCCGATGTT TCTAGAAAAA AGAGAAAACA AGTTATTGAT
AAACTGGCAG CCGTCAATAT TTTGCAAACA TACCTGGATA GACAGGTAAA TAAAAATAAT
AATTAA
 
Protein sequence
MRIMGFDLGE ATIGVAVSDA LQLTAQGKTV IKRQSLEKDI EQVTKLIEDY QVSKLIVGLP 
KNMNGSLGQM ADQIMDFIKS LEQEVDIPIE TVDERLTSRM AEQTLLEADV SRKKRKQVID
KLAAVNILQT YLDRQVNKNN N