Gene Nther_1737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1737 
Symbol 
ID6317218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1802927 
End bp1803268 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content34% 
IMG OID642644113 
Productputative RNA polymerase, sigma 28 subunit, FliA/WhiG family 
Protein accessionYP_001917899 
Protein GI188586354 
COG category[K] Transcription 
COG ID[COG1191] DNA-directed RNA polymerase specialized sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.0277937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTTTA GAGCAACTAA AAAGAACCGC TCAGAATCTT ATTTGCAAGA TCCTATAGGT 
GTTGATAAAG AGGGAAATGA GATAACTTTA CTTGACATAC TCGGGTCTGA TTCTAATATG
GTTATTGATC AAGTGACTTT ATCAATAGAC AAGGACAAAT TACGTAGAGT TATCAAAACC
TTAAAACCTA GAGAGGAAAA AATTCTTAGA TGGAGATTTG GATTATCCAA TGAGAAAGCT
TTAACCCAAA AAGAAGTAGC TGAAAAGCTA GGGATTTCTC GTTCTTATGT TTCTAGAATT
GAGAAGCGGA TTTTAAATAA GATGGGCGAA CTGCTCAGTT AA
 
Protein sequence
MHFRATKKNR SESYLQDPIG VDKEGNEITL LDILGSDSNM VIDQVTLSID KDKLRRVIKT 
LKPREEKILR WRFGLSNEKA LTQKEVAEKL GISRSYVSRI EKRILNKMGE LLS