| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1694 |
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| Symbol | |
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| ID | 6314337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | - |
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| Start bp | 1769695 |
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| End bp | 1771590 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 642644070 |
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| Product | 1-Deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_001917856 |
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| Protein GI | 188586311 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.134316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.0277937 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAAAT TATTGAGTTA TATTAATACA TCAGAAGATT TAAAACATCT ATCAACAGAA
GATTTGAACA AGCTGGCTGA GGAACTCAGG GAATTTTTAA TAAGCTCTAT TTCTATAACG
GGTGGTCACC TTGCACCTAA TTTAGGGGTA GTGGAACTGA CTCTTGCTAT TCATAAGGTG
TTTTCACCTA TACAAGACAA AATTGTTTGG GATGTAGGTC ATCAATCTTA TATCCACAAA
ATATTGACTG GGAGAAAAGA GCAATTTTCA ACCCTGAGAC AGTTTGGAGG ATTATCCGGC
TTTCCTAAAC CTGAAGAAAG TCGTTATGAC GCTTTCGGTA CTGGACATAG CAGCACCTCG
ATTTCAGCAG CTCTTGGTAT GGCAAAGGCT AGAGACTTAC AAGGAAGTAA TGAAGAAGTC
TTGGCTGTAA TCGGAGACGG TGCAATGACT GGTGGAATGG CCTTTGAAGC CATGAACCAT
GCTGGCCATG AACAAGCAAA TATGACAGTA ATTTTAAATG ATAATGAAAT GTCAATCGGA
ACAAATGTAG GTGCTCTGTC TTCATATTTA TCTCGATTAA GAACTGATCC TAAATACCAC
AGAATTAAAG AAGATGTAGA GTTTCTGTTA AAACGAATCC CAGCCATTGG CGGTAAAATG
ATGAAATCAG TTGAACGGGT TAAAGATAGC ATGAAATATT TGATGGTATC GGGAATGTTG
TTTGAAGAAT TAGGTTTTAC TTATATTGGA CCTATTGATG GTCATAATAT TCCTCAACTC
ATGGAAGTAC TAAACAATGC CAAGGATAAA AATGGCCCAG TCCTTGTTCA TGTAATCACC
AAAAAAGGTA AGGGATACGA ACCTGCCGAG AAATTTCCCG ATAAATTTCA CGGAACTGGT
CCCTTTGAGA TTGAAACGGG TAATGCTCCG AAAAAGGCAG AAACTGCACC AAGTTACTCT
AAAGTTTTTG GAGATACTAT CTCAGAAATT GCCAGGAAAA ATGAATCGGT TGTTGCGATT
ACAGCAGCTA TGAAGGATGG AACCGGTTTA ACTAATTTTG CTAGAGAATT TCCTGAAAGA
TTTTTTGATG TAGGGATTGC AGAACAACAT GCAATTACTT TTGCAGCAGG TTTAGCTCGT
AAAGGGTTTA AACCAGTAGT TGCTATATAT TCAACTTTTT TACAAAGAGC ATACGATCAA
ATTATCCATG ATGTTTGTAT GCAAGATAAT CCTGTGATTT TTGCAATTGA TAGAGCTGGT
ATAGTTGGAG GAGATGGAGA AACCCATCAA GGTTTATACG ATTTATCGTA CCTTAGAAGC
ATACCAAATT TGATAGTGAT GGCACCTAAA GATGAAGCTG AATTACAAAG AATGTTAAAT
ACAGCAGTTA ACATCAATAA ACCTGTAGCT ATAAGATATC CTAGAGGAAA AGGTGAAGGT
GTAACTCTTT GGGAGAATAT GACACCTATT CCTTTGTATA AAGGAGAGAC TATACGAGAA
GGATCCCAAG TAGCAATGAT TGGAGTAGGG AAGATGGTAC CTGACATGCT TGAAGTGGCT
GATATGCTGA AAAAAGAAGG TATTGAACCC ACAGTTTTCA ATGCTAGATT TGTTAAACCT
TTAGACGAAA GTTCAATTCT TGAAATAGCT CAAAAACACG AATACATTTA CACTTTCGAA
GAAAATACAG AATTAGGAGG ATTTGGTTCC CAAGTATTGG AATGCTTATC TAAACATGGT
CTAGCACATA AATTAATTGA TAGATTTTGT TTACCTGATG AATATATTCC GCATGGTGAT
AGATCTAAAG TACTAAGTCA ATATAGTTTA CATTCCCAGG AATTAATAAA TAAAATATTA
AATCGCCTTA GAGGTGAACA GATTGAGCAA GGATAA
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| Protein sequence | MTKLLSYINT SEDLKHLSTE DLNKLAEELR EFLISSISIT GGHLAPNLGV VELTLAIHKV
FSPIQDKIVW DVGHQSYIHK ILTGRKEQFS TLRQFGGLSG FPKPEESRYD AFGTGHSSTS
ISAALGMAKA RDLQGSNEEV LAVIGDGAMT GGMAFEAMNH AGHEQANMTV ILNDNEMSIG
TNVGALSSYL SRLRTDPKYH RIKEDVEFLL KRIPAIGGKM MKSVERVKDS MKYLMVSGML
FEELGFTYIG PIDGHNIPQL MEVLNNAKDK NGPVLVHVIT KKGKGYEPAE KFPDKFHGTG
PFEIETGNAP KKAETAPSYS KVFGDTISEI ARKNESVVAI TAAMKDGTGL TNFAREFPER
FFDVGIAEQH AITFAAGLAR KGFKPVVAIY STFLQRAYDQ IIHDVCMQDN PVIFAIDRAG
IVGGDGETHQ GLYDLSYLRS IPNLIVMAPK DEAELQRMLN TAVNINKPVA IRYPRGKGEG
VTLWENMTPI PLYKGETIRE GSQVAMIGVG KMVPDMLEVA DMLKKEGIEP TVFNARFVKP
LDESSILEIA QKHEYIYTFE ENTELGGFGS QVLECLSKHG LAHKLIDRFC LPDEYIPHGD
RSKVLSQYSL HSQELINKIL NRLRGEQIEQ G
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