Gene Nther_1685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1685 
Symbol 
ID6315549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1760639 
End bp1761334 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content35% 
IMG OID642644061 
Productglycosyl transferase family 2 
Protein accessionYP_001917847 
Protein GI188586302 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.908588 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.00379696 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTTATC CTAAGGTTTC TGCTATTATT CCAGCCTGTA ATGAAGGGAA TAATATCGTA 
GATACTATCA GAGGTTTGCA AGATTTAAAT GAAGTTAATG AAATTATTGT TGTAGATGAT
GGCTCAAAAG ATGAAACTTT TGAATTAGCT AAGGCTCAAG GGGTAAGTTG TGTTAAACTA
GATAAAAATT ATGGAAAAGG TAAAGCCCTA TATACAGGGG TTGAGTCTAG TGATAGTCAG
GTGGTAGCCT TTGTTGATGC TGATCTCGGT CAAACCGCTA AAAAAATCAA GAGTTTGATT
ACTCCAGTAG TGTGCGGTGA GGCTGATATG GCAATAGTTA AGTTTCCTAA AGAAGGCAAT
TATAAATACG GTGGATTTGG ATTAGTAAAA AAGTTGGCTA AAACTGGGAC TTATTTATTG
ACAGGGAAAG TAACCGAAGC TTCTCTGTCA GGACAAAGAG TTATAAACAG AGAACTGGCT
AAACAGCTTT TAGAGTTAGA AATTGACAGT GGATATGGAG TAGAACTGGG AATGACAGTT
GAGGCTTTAA AACGAGAAGC AAAAGTGATT GAAGTTGAAG AAAATATGTC TCACAGAAAG
ACTGGTAAAG ATTTACAAGG GTTCCTTCAT CGTGGGAAAC AGTTTATACA AATTTTGATA
ACATTATTAC GTAAAAAATT TGTTCAAATG TACTAA
 
Protein sequence
MTYPKVSAII PACNEGNNIV DTIRGLQDLN EVNEIIVVDD GSKDETFELA KAQGVSCVKL 
DKNYGKGKAL YTGVESSDSQ VVAFVDADLG QTAKKIKSLI TPVVCGEADM AIVKFPKEGN
YKYGGFGLVK KLAKTGTYLL TGKVTEASLS GQRVINRELA KQLLELEIDS GYGVELGMTV
EALKREAKVI EVEENMSHRK TGKDLQGFLH RGKQFIQILI TLLRKKFVQM Y