Gene Nther_1676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1676 
Symbol 
ID6315323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1751799 
End bp1752548 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content42% 
IMG OID642644052 
Productthiamine pyrophosphate protein domain protein TPP-binding 
Protein accessionYP_001917838 
Protein GI188586293 
COG category[C] Energy production and conversion 
COG ID[COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.392658 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.0276395 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAAC AAGTATTTAA AAAACCTGAA GCCTTAACTG ATAATCAAAT GCACTATTGC 
CCTGGTTGTA CTCATGGAAT AATTCACAGA TTGGTTGCGG AATCCATGGA TGAATTAGGA
GAAAGAGAAA GCGCTGTAGG TGTTGCTCCT GTTGGATGTG CAGTTTTAGC TTATAATTAC
TTTAATTGTG ATATGCAGCA AGCTGCCCAT GGGCGAGCTC CTGCAGTGGC CACCGGCATT
AAAAGAGTAC ATCCTGAAAG CTTAGTGTTC ACTTATCAAG GTGACGGTGA CTTGGCTTCT
ATTGGTACTG CAGAAATTGT ACATGCTGCG GCCCGTGGTG AAAATATCAG TGTAATATTT
GTCAATAATG CAATTTACGG AATGACTGGA GGACAAATGG CTCCTACCAC CTTGGAGGGG
CAAAAAACTA CCACTTCACA AGCTGGGCGA GACCTAAACA TTGCAGGATT CCCCATTCAA
ACGTCCGAAA TGCTGGCTAC TTTGGATGGA GCTAGTTATA TTACACGTCA AACTGTTCAT
AATGTGGGTG GTGTACAGAA GACCAAAAAA GCAATTAAGA AAGCTTTTGA AATCCAAATG
AACAAACAAG GTTTCAGCAT GATCGAAATT CTATCAAACT GCCCAACCAA TTGGGGTATG
AGTCCAAAAG AATCTATTCA ATGGATAAAT GATAATATGG TACCCAACTA TCCTCTCGGG
GATGTAAAAA CCCCCAAGGA GGTGGAGTAA
 
Protein sequence
MAKQVFKKPE ALTDNQMHYC PGCTHGIIHR LVAESMDELG ERESAVGVAP VGCAVLAYNY 
FNCDMQQAAH GRAPAVATGI KRVHPESLVF TYQGDGDLAS IGTAEIVHAA ARGENISVIF
VNNAIYGMTG GQMAPTTLEG QKTTTSQAGR DLNIAGFPIQ TSEMLATLDG ASYITRQTVH
NVGGVQKTKK AIKKAFEIQM NKQGFSMIEI LSNCPTNWGM SPKESIQWIN DNMVPNYPLG
DVKTPKEVE