| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1601 |
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| Symbol | |
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| ID | 6315674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | - |
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| Start bp | 1677674 |
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| End bp | 1678741 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642643972 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_001917763 |
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| Protein GI | 188586218 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.799203 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 3.52104e-23 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | TTGTTTGAAT TTGAACATGA GTTTGAAAAG ATTTTCGATG AGTTATCAAA AATAGAAGAG
CATATAGAAC AGGATCCCGA GAAAAAGGAT GATAATGATA TTACTGAGCG GTTGTTAAAA
TTAAGAAGAG AAATAGATAA GTGTATAGGG TACTGGTTAC AATTTGAAGA AAAACTTTGG
TATCTACAAG ACGAATACGG GATTGATATT CCTGATCAAC TGGATGATAG TTTGATTTCA
GCATATTTAG GTATTTCTAA TGAAGAGGTT TCTAACTTAG AGTTATTAAA TTCCTTTTCT
AAAAGTACCG AAGAATATGA TGAGGAACTG GTTGATAAAT TGTCAAGTAT GAAAGAGGCT
TATAGAAATA AAGACCACGA GAAAAATCAT TCCAATGAAG TTAATTCTGA GCAAAATAAA
GATAATAAAA GTATTCATTC TTTTAGAAAA GGTCTTGGTT ATTTTAATTT AGCCATGTTA
GAAGAGGCCA AAAACGAATT TGAACAAGTA GTATCCGAAG AACCAAATAT GATTATGGGT
CATTATTTCT TAGGATTAGC GTATTTTTAT AAGAGTGAAT ATGATAAAGC CTTAAAAAAA
TTTCGCCTAG TTGTTGAATT GGTAGAGGAT GAGGAAATCC TAGCATTAGC CTATAACGCC
ATAGGTAACA TATATGTGGA TAAAGAAGAA CAAGAGAAAG CACTTACTAA TTACCTTAGG
GCATGTGACT ATACTGAGAG TTTTCCGGAT ATCTATTTTA ATTGTGGTGC TATTTATTTT
AATCTTGGAG ACTTTCTTCA AAGTGTAAAA TACTTTCAAA AAGCTTTACA GATAACGTCA
AATAATAGCG ATTGGGAACT TCACTTATAT ATAGGAAAAG CATACACCTA CTTAGGGGAT
CTAGATAAAG CATTAAAACA TCTTAAAAAG GCTTTAAGAA TAGAACCCAA AAATGAAGAA
ATTCACTTTG AATTAGGTCT CATTTATCAA CTCAAACAGG AGCAATATCT AGCCGCAAAA
GAGTACGAAA GGGCAAAACA ACTATCCCAG AAAAAATCTG AGCAATAA
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| Protein sequence | MFEFEHEFEK IFDELSKIEE HIEQDPEKKD DNDITERLLK LRREIDKCIG YWLQFEEKLW
YLQDEYGIDI PDQLDDSLIS AYLGISNEEV SNLELLNSFS KSTEEYDEEL VDKLSSMKEA
YRNKDHEKNH SNEVNSEQNK DNKSIHSFRK GLGYFNLAML EEAKNEFEQV VSEEPNMIMG
HYFLGLAYFY KSEYDKALKK FRLVVELVED EEILALAYNA IGNIYVDKEE QEKALTNYLR
ACDYTESFPD IYFNCGAIYF NLGDFLQSVK YFQKALQITS NNSDWELHLY IGKAYTYLGD
LDKALKHLKK ALRIEPKNEE IHFELGLIYQ LKQEQYLAAK EYERAKQLSQ KKSEQ
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