Gene Nther_1542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1542 
Symbol 
ID6315427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1623538 
End bp1624572 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content35% 
IMG OID642643917 
ProductLeucine-rich repeat, ribonuclease inhibitor subtype 
Protein accessionYP_001917708 
Protein GI188586163 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.400143 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0000648259 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGTCACTAA GGAAATTAGC TTATTTAGCA ATAGCAGCAA GTTTAACAAT TTTAATCTCT 
TTTACGATAG GTTGTACTCC AGAGGAGTAT GAAGTGGATG TACAAGATGA AAACTTAAAA
GCAGCAATTA AGGAAGAACT AGGTGTAGAG CAAATAACTG AAGAAAATAT TGAAGATTTA
ACAACTTTGA CTGTAAGTGG TGAAGATATA AATATCAAAG GAATTGAATA TGCAATCAAT
TTACAAGAAC TTAGCCTTCA AGGAACCAAA ATAGAAGATG TGAATACACT CGCAGAAGTG
GATAATTTAG AAGAGCTCAA TCTCAACTAT ACGGAAATAA CAGATGAAGG AATAGAACAG
TTAGCAGAAG CTGATAATTT AAAACAGATT AGTCTTACCC ATACGGATGT AACAGATGAA
GGAACAAAAC TCCTAGCGGA ATCTGAAAGT TTAGAAAGGC TTATTCTTAG CGGAACCGAA
GTAACAGATG ACGGGTTAGA ACACTTAATA GAAGCAGATA ACTTAAAAAA GCTTGATCTT
CACGGAACCG ATGTAACAGA TGATGGAGCA GAACACCTTG CGGAAACTGA TAATTTAGAA
AAACTTAGTC TTGTAGACAC TGAAGTAACA GATGAGGGAA TAGAACAGCT AGTAAAAGTA
GATAATTTAG AAGTGCTTAT TCTTGGATGG ACTGAAGTAA CAGATAATGG AGTAGAATAC
CTGGCAGAAG CAGACAATTT AGAAATGCTT CATCTTGATG GAACGGAAAT AACAAATGAA
GGAGTAAAAT ATCTAGCAGA AGCAGATAAT CTAGAAGAGC TTGACCTTAA ACAAACCAAA
GTCACAGATG TAAACGCATT AGCTGAAACT GATAGTTTGG AAGAGCTTGA TCTTTGGGAT
ACCGATGTAA CAGATGAAGG AGTAAAAGAA CTGGCAGAAG CTGATAGTTT AAAAGTGGTT
AATCTTGATG AAACAGAAGT AACAAATGAA GGAGTAGAAC ACCTAGAAGA TGAAGATATT
TATATAAGAT ATTAG
 
Protein sequence
MSLRKLAYLA IAASLTILIS FTIGCTPEEY EVDVQDENLK AAIKEELGVE QITEENIEDL 
TTLTVSGEDI NIKGIEYAIN LQELSLQGTK IEDVNTLAEV DNLEELNLNY TEITDEGIEQ
LAEADNLKQI SLTHTDVTDE GTKLLAESES LERLILSGTE VTDDGLEHLI EADNLKKLDL
HGTDVTDDGA EHLAETDNLE KLSLVDTEVT DEGIEQLVKV DNLEVLILGW TEVTDNGVEY
LAEADNLEML HLDGTEITNE GVKYLAEADN LEELDLKQTK VTDVNALAET DSLEELDLWD
TDVTDEGVKE LAEADSLKVV NLDETEVTNE GVEHLEDEDI YIRY