Gene Nther_1499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1499 
Symbol 
ID6314835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1573521 
End bp1573775 
Gene Length255 bp 
Protein Length84 aa 
Translation table11 
GC content32% 
IMG OID642643879 
ProductRNA-binding protein Hfq 
Protein accessionYP_001917670 
Protein GI188586125 
COG category[R] General function prediction only 
COG ID[COG1923] Uncharacterized host factor I protein 
TIGRFAM ID[TIGR02383] RNA chaperone Hfq 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0000000130103 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGTCAAAAA ACACAATTAA TTTACAGGAT AATGTTTTAA ACCAGGTGAG GAAGAACAAA 
ATTACAGTAA CTATTTTTTT GGTCAATGGC TATAAAATTC GCGGCCTAAT TAAAAGTTTC
GATAATTTCA CACTATTGAT GGAGGTTAAT GGTGAACAAC AGATGATTTA TAAGCATGCA
GTTAGTACCA TAATCCCAGG TAAAACTCTC AATCTCTTCT CCGATCAATC CGATAAAAAT
GATCAAGAAC AGTAA
 
Protein sequence
MSKNTINLQD NVLNQVRKNK ITVTIFLVNG YKIRGLIKSF DNFTLLMEVN GEQQMIYKHA 
VSTIIPGKTL NLFSDQSDKN DQEQ