| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1460 |
|---|
| Symbol | |
|---|
| ID | 6314937 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | + |
|---|
| Start bp | 1529352 |
|---|
| End bp | 1531052 |
|---|
| Gene Length | 1701 bp |
|---|
| Protein Length | 566 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 642643840 |
|---|
| Product | beta-lactamase domain protein |
|---|
| Protein accession | YP_001917631 |
|---|
| Protein GI | 188586086 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily |
|---|
| TIGRFAM ID | [TIGR00649] conserved hypothetical protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCAGCAA GAAAACAGAA TAATAGAAAT GGTAATGGCT CCAGAAATTC ATTACAAGTC
ATTCCCTTGG GCGGGGTCGG TGAAATTGGA AAAAATATGT TTGTAATTAA GTACGGGAAT
GATATGATTG TCATTGACGC CGGATTAAAA TTTCCCGATG AAGATATGTT GGGAGTAGAT
TTCGTCATTC CTGACATGTC TTATCTGTTT GAACATAAGG ACAACATTAA AGGAATTTTC
TTAACCCATG GGCATGAAGA TCACATCGGG GCTTTACCGT ATTTAATGAA AAAAATTGAT
GCACCAGTTT ATGGTACTAA ACTAACTTTA GGTTTGGCTG AACGTAAATT GGGAGAACAA
CCTATTCAAA AGTCGATTTC TTTAAAGAAG ATATTACCTG GCAAAACTAT GCAATTAGGT
CCATTTAAGA TGGAATTTTT CTCAACTAAC CACAGTATTC CAGATTCAAT TGGCATAGTT
GTTCATACAC CTGAAGGAAC TATAGTCCAT ACAGGAGATT TTAAATTTGA CCATACACCA
GTTAGTGGTA AAGTAGCAGA TTATAATAAA CTTGCTGAAC TGGGAAATAA GGGAGTACTA
TGCTTACTAT CGGATAGTAC CAATGCTGAA AGGCCGGGAT ATACTGAAAG TGATAGAACA
GTGGGAGAAC GACTTGATGA AATCTTTCGC CAAGCTCCCA AAAGGATTAT CCTGGCAACT
TTTGCCTCTA ATATATACAG AATTCAGCAA GTTATTAACT CAGCCAAAAA GTATGGTAAA
AAAGTCGGAG TCGTAGGTCG CAGTATGATA AATGTGATTG AAGCGGCTTC AGAGCTAGGT
TATCTTGAAA ATGTAGACGA TGTGGTGATT GATGATATAG AAAGAGTCAA TCAATTGCCT
CTGGAAAAAA CTGTGTTGCT AACTACGGGC AGTCAAGGAG AGCCCATGAG CGCATTAACC
AGGATTGCTA CTGATGACCA TCGAAAAGTC GAAATTATGC CCCATGATAC TGTGGTGATA
GCTGCAACAC CTATTCCAGG AAACGAAAAG TTAATTTCTA GAAGTATAGA TAATTTGTTT
AAACGAGGTG CCCATGTCAT CTATCAATCT GTTTCCGGAG TCCATGTATC CGGTCATGGA
AGTCAGGAAG AATTGAAAAT GATGCTGAAC CTTGTTAAAC CTAAGTATTT AATCCCTTTC
CATGGCGAGT ACAGAATGCA GGTACATCAT AAAAACGTAG CAGAAAAGTT AGGTATGCCA
TCAAAAAATG TATTTTTAGC AGAAAATGGT GAAGTAATTG AATTTAACAG AAAACGAGGC
AAAGTTAATG GCAAGGTTCC TGCAGGTAAA GTTTTAGTTG ATGGTTTAGG TGTAGGTGAT
GTAGGTAATA TCGTTCTAAG AGATCGACGA CTGTTAAGCC AGGATGGTAT CCTGATTGTA
GTGATTGGTG TAGATAAACA GAACAAAACA TTAATTGCCG GCCCGGATAT AGTTTCTAGA
GGATTTGTAT ATGTCAGAGA ATCAGAAGAG TTGTTAGAAG AGGCCCGTGA ACATGTTGTT
AAAGCTGTAA ACAAGATGTC AAAAAGTAAA ATGAATGAGT GGCAGGCAAT TAAGAGTTCT
GTCAAAGATG TTTTAGGTCA ATATCTATGG GAAAAAACCC GGAGACGTCC CATGATTCTT
CCAATAATTA TGGAAGTTTA A
|
|---|
| Protein sequence | MSARKQNNRN GNGSRNSLQV IPLGGVGEIG KNMFVIKYGN DMIVIDAGLK FPDEDMLGVD
FVIPDMSYLF EHKDNIKGIF LTHGHEDHIG ALPYLMKKID APVYGTKLTL GLAERKLGEQ
PIQKSISLKK ILPGKTMQLG PFKMEFFSTN HSIPDSIGIV VHTPEGTIVH TGDFKFDHTP
VSGKVADYNK LAELGNKGVL CLLSDSTNAE RPGYTESDRT VGERLDEIFR QAPKRIILAT
FASNIYRIQQ VINSAKKYGK KVGVVGRSMI NVIEAASELG YLENVDDVVI DDIERVNQLP
LEKTVLLTTG SQGEPMSALT RIATDDHRKV EIMPHDTVVI AATPIPGNEK LISRSIDNLF
KRGAHVIYQS VSGVHVSGHG SQEELKMMLN LVKPKYLIPF HGEYRMQVHH KNVAEKLGMP
SKNVFLAENG EVIEFNRKRG KVNGKVPAGK VLVDGLGVGD VGNIVLRDRR LLSQDGILIV
VIGVDKQNKT LIAGPDIVSR GFVYVRESEE LLEEAREHVV KAVNKMSKSK MNEWQAIKSS
VKDVLGQYLW EKTRRRPMIL PIIMEV
|
|---|
| |