| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1437 |
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| Symbol | |
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| ID | 6314860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | + |
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| Start bp | 1503317 |
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| End bp | 1504387 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 642643817 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_001917608 |
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| Protein GI | 188586063 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.198015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.0526767 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAGAC GTCATAGAAC TTTTCCTGTA AAAGTTGGAT CTGTCACTAT TGGAGGAACT
GCTCCGGTTA CCATCCAATC AATGACCAAT ACAGATACCA AAGATACTGA AAAAACTTTA
GCCCAAATCA AGGATTTGGT TGAAGCTGGT TGCCAATTAG TTAGAGTGGC GATTCCTGAT
GAAGAATCTG TTAACAGTTT TAAAACTTTA ACACAGTTTT CACCAGTCCC TTTGATTGCG
GACATCCACT TTAGTTATCA ATTAGCAATC AAAGCAATAG AGGCAGGTGC CAGCAAAATT
AGAATAAACC CCGGTAATAT TGGGTCACGT CAAAGAGTGG CAAAGGTTGT CGAAAAAGCC
AAGACTCACA ATGTGCCAAT TCGAGTGGGC ATTAATTCAG GATCAGTTGA AAAAAACCTC
CTCCAAAAAT ATGGTGGACC TACTCCAAGT GCATTGGTGG AAAGCGCTGT CAATAATGTC
ATGATGTTAT CTGAGATGGG TTTTGGCGAT GTAGTAGTAT CCATTAAAGC TTCGGATGTC
AATACTACAG TTAAAGCTAA CCAAGAGTTT GCCACAAGAT TACCTAATCC TTTGCATTTA
GGCATAACAG AGGCAGGGAC TATTAAACAA GGTACTATTA AGAGTTCTGT AGGAATTGGA
ACTTTACTAT CTCATGGAAT TGGAGATACA CTGCGAGTTT CATTATCGGG TTCTCCTATA
GAAGAAGTTT CTGTTGCGCG CGGAATATTA TCTTCTTTGA ATTTAGCTGA AGGGCCTCGG
ATTGTATCAT GCCCTACTTG TGCCAGATCA AATATATCTG TCGAGGACTT GGCCAGTACC
GTAGAAGACA GGCTAAAAGA TCTCAACACT TCTCTCACTG TTGCTGTTAT GGGTTGTGAA
GTCAATGGTC CAGGTGAAGC CAAGGAAGCT GATATAGGAA TTGCTGGCAG TAAAGAATAT
GGGGTACTGT TCAAAAAGGG AAAGATTATA GATAGAGTAC CTAAAAATCA ATTACTTGAA
GTCCTGTCTC GAGCCATCGA TGAATATATT GATGAGATTC ACAGCAAGTA A
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| Protein sequence | MSRRHRTFPV KVGSVTIGGT APVTIQSMTN TDTKDTEKTL AQIKDLVEAG CQLVRVAIPD
EESVNSFKTL TQFSPVPLIA DIHFSYQLAI KAIEAGASKI RINPGNIGSR QRVAKVVEKA
KTHNVPIRVG INSGSVEKNL LQKYGGPTPS ALVESAVNNV MMLSEMGFGD VVVSIKASDV
NTTVKANQEF ATRLPNPLHL GITEAGTIKQ GTIKSSVGIG TLLSHGIGDT LRVSLSGSPI
EEVSVARGIL SSLNLAEGPR IVSCPTCARS NISVEDLAST VEDRLKDLNT SLTVAVMGCE
VNGPGEAKEA DIGIAGSKEY GVLFKKGKII DRVPKNQLLE VLSRAIDEYI DEIHSK
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