Gene Nther_1420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1420 
Symbol 
ID6315020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1490514 
End bp1491152 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content41% 
IMG OID642643800 
ProductCheC, inhibitor of MCP methylation 
Protein accessionYP_001917591 
Protein GI188586046 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG1776] Chemotaxis protein CheC, inhibitor of MCP methylation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.255557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.358865 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGATT TTAATTTAAA TGAGCTTCAC ATAGACATTT TGAAAGAATT AGGTAATATA 
GGGGCAGGTA ACGCCACAAC AGCTTTATCA CAGTTCTTAG GTAAGTCTAT CAAGATGACG
GTTCCAGAAG TTAATATACT TCCTTTTGAA GAAGTTCCCG AAGTAGTAGG AGGCCCAGAG
GAATTAGTCG CAGGAGTGTA CATGAGAATT GAGGGAGAAG CACCAGGGTC GCTGATGCTA
TTGCTAAAAC AAGAAGATGC GCTAAAACTC ATAGATGTAC TTTTGGGAAG GGACAGTTCG
CAGGAGAAAG TCGGTACCGC AGACCTAGAC GATATAGAAC AATCGGCCCT GATGGAAACA
GGGAACATAG TCGCAAATTC TTATTTAAAT TCCCTGGCCG ATATGACTAA AATGGAAGTA
GGACCATCCG TACCTGCTAT TTCAGTAGAT ATGGCAGGAG CTATCTTAGA GGTGATTCTA
TTTCAAGTAG ATGAAGAGAT CAGTGAACAC GTGATCTTGA TCGGTACCGA ATTTGCCTAT
GAGGGAAATA CCATTAGAGG ACACTTTTTT CTGATTCCCG ATAATGAATC CTTCCCAAAA
ATAATAAAAT CTTTGGGGTT TGACTATGAC GATAGTTAA
 
Protein sequence
MSDFNLNELH IDILKELGNI GAGNATTALS QFLGKSIKMT VPEVNILPFE EVPEVVGGPE 
ELVAGVYMRI EGEAPGSLML LLKQEDALKL IDVLLGRDSS QEKVGTADLD DIEQSALMET
GNIVANSYLN SLADMTKMEV GPSVPAISVD MAGAILEVIL FQVDEEISEH VILIGTEFAY
EGNTIRGHFF LIPDNESFPK IIKSLGFDYD DS