Gene Nther_1418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1418 
Symbol 
ID6315018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1487833 
End bp1489974 
Gene Length2142 bp 
Protein Length713 aa 
Translation table11 
GC content36% 
IMG OID642643798 
ProductCheA signal transduction histidine kinase 
Protein accessionYP_001917589 
Protein GI188586044 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.224123 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAATC AATATCTTGA TGTTTTTATT GATGAAGCGA GAGAACATTT ACAAACCATG 
AATCAAAATT TGATTGATCT GGAACAAAGT CCTGAGGATC GATCTATTTT AGATTCTTTG
TTTAGGGTTG CTCATACATT AAAAGGGATG GCAGCCACTA TGGGGTATCA AGGAGTTGCA
AATTACACCC ATAAATTAGA AAATATCCTG GATAGTTTTC GCCAAGGTGA GAAAAAGATT
ACATCGAACA TTATTGATTT ATTGTTAGAA GGAGCCGATG CCCTAGAAGA ATTCGTAAAT
AAATTGTCAG AAGGTGAACA AGTAGATCTA GATTTTAGTA GTATGCAGTC ACGCCTAGAA
CAAGCTTTTG CTAAGGCGGA CAGAGATTCT TTTGAGACTC CTTCCCAGGC ACAAGATACT
TCTTCTACTA ATAATGAACA GTCCAAGGGA GAAGCTGAAA TGGCTGCAAC TAGTGAAGTT
CAGACTGACT CTTCAGGGGA AAAGGCAGGA TCAGAAAGTG ATATTTTAGA TTTAAATGAA
TATGAAGGAA ACTTGTTAAA ATCGGCTTTA AACGACGATT ATTCGGCCTA TCACATTAGA
GTTGTTTTTG ATGAAAATGT ACTTTTAAAA GGTGCTAGAG CTTTTATGGT ATTTCAAAAA
GTAGAAGCTA GAGGAGAAAT CATTAAATCT GACCCAGAAG TTGAAGAAAT TGAAGATGAG
AACTTTGATC AGGAAATTGA ACTGATAGTG GTAACCAAGG TTGATCAGCA AGAAATAAAG
TCGGATATTG AACAGGTTTC AGAAATAAAT GAAGTTTACC TAAAAGTACT CCAAGAGGAT
CAACTTACAG ATAAAACAGA CGAAGGAGCA GATGAAGACG ATGATGAGAA AGTTCAGACA
GAAGAACAGA AAGTTCAACA AAAAGACAAA CAAGATGAAG CCAAAGATTC AGATGGACAA
AGCCAGCAAA AGATTAAGAC TGGAAAGACC GTCAGAGTAG ATATTGAGCG ATTGGACAAG
TTAATGAATT TAGTAAGTGA ACTCGTTATT AACAAGACTC GCTTAGAACA GGTAGCAAAT
AACAAAGAAT CCTCTGAACT TGGAAAAACT AGTGAACAAT TTAGTAGAAT TACCAGTGAA
ATTCAAAATG TAGTGATGAA AGTTAGAATG GTTCCTTTAG ACCAGGTTTT TAACCGTTTC
CCAAGAATGG TAAGGGATCT ATCAAGATCC TTAAATAAAG AAGTTAATTT AGTCATTGAA
GGAAGGGAAA CAGAGTTAGA TCGATCTTTG ATAGATGAGA TCGGTGACTT ATTAATGCAT
TTAATAAGAA ATGCTCTAGA CCATGGTCTA GAAGATTCTG AAACCAGACA TAAATCGGGG
AAATCAGCCA AGGGAAATAT TCATATTAAA GCTTATCACA ACGAAAACAA TGTAGTTATT
GAAGTCTCAG ATGATGGTAA GGGAATTGAT CCAGAAAAAG TAAGGAAAAA AGCAATTTCC
AGAGGATTGC TCGATAGCCA ACAAAGTGAA CAAGTGCCTG ATTCAGAAGT GATTAACTTT
TTATTCACTC CAGGGTTTAG TACATCTGAT GAGGTCTCCG AGGTATCTGG TAGGGGAGTT
GGCCTGGACG TGGTCAAAAG TAAACTTGAA AATCTTGGTG GACGCGTGGA GTTAGACAGT
GAAATTAATC AAGGCACAAA ATTCACTATG TATTTACCTT TAACTCTAGC TATAATCCAG
GCATTAATGG TCAATGTAGG CAATGAGCAA TATGCTTTAC CATTGTCATC CATTGAAGAA
ACGACAATTT TAACAGATCA GGATATCCAA AAGGTTCAAG AACAAGAAGT TATCAGGTTA
AGGGATCAAT TGGTACCTCT AATTGATCTG CACGACATTT TAGATGTTGA ACGTACTGAA
AATGGCGAAC AAGAGCATGC TGAACAAGAA AGATTTGCTA TTATAGTTAG AAAAGGCGAT
AAAAAGGCAG GATTAATAGT TGATGAACTA CTGGGACAGC AAGAAGTTGT AATAAAGTCT
CTAGGTGGCT TTTTGGCCGA TATTAAAGGG TTTACAGGAG CAACAATTTT AGGTGATGGA
AAAGTTGCTT TAATTTTAGA TGTGAATTCA TTATTATTTT AA
 
Protein sequence
MDNQYLDVFI DEAREHLQTM NQNLIDLEQS PEDRSILDSL FRVAHTLKGM AATMGYQGVA 
NYTHKLENIL DSFRQGEKKI TSNIIDLLLE GADALEEFVN KLSEGEQVDL DFSSMQSRLE
QAFAKADRDS FETPSQAQDT SSTNNEQSKG EAEMAATSEV QTDSSGEKAG SESDILDLNE
YEGNLLKSAL NDDYSAYHIR VVFDENVLLK GARAFMVFQK VEARGEIIKS DPEVEEIEDE
NFDQEIELIV VTKVDQQEIK SDIEQVSEIN EVYLKVLQED QLTDKTDEGA DEDDDEKVQT
EEQKVQQKDK QDEAKDSDGQ SQQKIKTGKT VRVDIERLDK LMNLVSELVI NKTRLEQVAN
NKESSELGKT SEQFSRITSE IQNVVMKVRM VPLDQVFNRF PRMVRDLSRS LNKEVNLVIE
GRETELDRSL IDEIGDLLMH LIRNALDHGL EDSETRHKSG KSAKGNIHIK AYHNENNVVI
EVSDDGKGID PEKVRKKAIS RGLLDSQQSE QVPDSEVINF LFTPGFSTSD EVSEVSGRGV
GLDVVKSKLE NLGGRVELDS EINQGTKFTM YLPLTLAIIQ ALMVNVGNEQ YALPLSSIEE
TTILTDQDIQ KVQEQEVIRL RDQLVPLIDL HDILDVERTE NGEQEHAEQE RFAIIVRKGD
KKAGLIVDEL LGQQEVVIKS LGGFLADIKG FTGATILGDG KVALILDVNS LLF