Gene Nther_1413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1413 
Symbol 
ID6315013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1481718 
End bp1483778 
Gene Length2061 bp 
Protein Length686 aa 
Translation table11 
GC content38% 
IMG OID642643793 
Productflagellar biosynthesis protein FlhA 
Protein accessionYP_001917584 
Protein GI188586039 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1298] Flagellar biosynthesis pathway, component FlhA 
TIGRFAM ID[TIGR01398] flagellar biosynthesis protein FlhA 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.176354 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.558149 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCATG TTGACTTGAT AGTTGTTCTT GCAGTCATAG CAATAGTATT AATGTTAATT 
TTACCAGTTC CGCCGGAACT GTTAGATTTT TTGCTGGTGT TGAATATAAC AGTAGCTCTA
ACTATATTAC TGATATCTAT GTATACTTTA GAACCTCTGC AATTCTCTAT ATTTCCGACT
CTGTTGCTGT TAGTTACTAT ATACCGTTTG GCTCTTAATG TTTCATCAAC TCGTCTGATC
CTATTGGATG CTTACGCAGG AGAAGTTATA ATGCAATTTG GAGAATTTGT CGTAGGTGGT
AACCCTATTG TAGGTTTTGT TATTTTCCTA ATTTTAATAT CAATCCAATT TATTGTTATT
ACCAAGGGGG CCGAACGGGT TTCAGAAGTA ACTGCTCGTT TCACTTTGGA TGCCATGCCT
GGTAAACAAA TGGCTATTGA TGCTGATCTA AATTCGGGTT TAATAGATGA ACAGCAGGCT
AAAGAGAGGC GTGAAGCTGT AGAACAAGAA GCTGATTTTT ACGGTGCCAT GGATGGTGCC
AGTAAATTTG TTAAAGGGGA CGCTATTGCA GGAATAGTCA TCACTATAAT AAATATATTA
GGTGGATTTG TCATTGGAAT GGCTCAACAG GGCATGACAT TTCAAGAAGC CCTGCAAACC
TTCACTTTAT TGACAGTTGG TGATGGCTTG GTGACCCAGA TACCTGCTTT ACTGGTGTCT
ACTTCCACAG GTATTGTAGT TACGCGAGCT GCTTCAGATT CTAACTTGGG TCAAGATGTT
GTCAGACAAA TACTTGCACA TCCCAAAGTT TTATTTATAG TTGGTGGTGT CTTAGCGGCT
GTGGGGGCAT TTCCCGGTAT GCCGCCTTTA CCATTTTTAG CACTAGGTTC TATTATGGGC
TTTTTAGGTT TTCAACTACG TACTTCTTTA AAATCAGAAG AACCTACTCC GGAAGAAGAA
CAAGCTGCTG CTACTGAAGA GGAAGCTGAA GAATATCGAA GTCCAGAGAA TGTTATGTCT
TTATTAAAAA TAGACCCAAT TGAATTTGAA TTCGGATATG GATTACTTCC CTTGGCTGAC
CCCGATCAAG GAGGGGATTT ACTAGACCGG GTTACTATGA TTAGAAGACA AGTAGCCATG
GAACTAGGTA TCGTAGTTCC TGTGATCAGA GTGCGGGACA ATATTCAACT GTCTTCCAAT
GAGTACTGCA TAAAAATTAA AGGAGTAGAA GTGGCCAAGG AAGAAGTACT ACCAAATCAT
TACTTAGTGA TGATTCCGGG AGATTCAAGT GGAAAACCAG AGGACCTGGG TTTAGAAGGA
ACAGAAACTA AAGAACCAGT ATTTGGTCTC CCTGCCTTAT GGATAGACGA AAGCCAGCGT
GAACAAGCTG AAATGTCGGG ATATACTGTA GTTGATCCTC CCTCGGTGTT AGCAACTCAT
TTAACAGAGA TTATAAAACA GCATGCCCAT GAGTTACTTG GAAGACAGGA AACTAAAGAA
TTAATAGACA ATGTTAAAAA TGATTATCCA GCGGTAGTAG AGGAATTGGT TGACAATATC
TTGAACATTG GAGAAATACG CAAGGTATTG GCAAATCTGT TAAAAGAGGG TGTATCAATC
AAAAACTTAT TAACTATTTT GGAAACTTTA ACTGATTACG GAGCAGTTAC CAAGGATACT
GATATGTTAA CAGAGTATGT TAGGCAAAAT CTCAACCGGG AAATAACCAC TAAATTAAAA
GAACTGCAAG GTGAGCCAAT AAAAGTGATT ACTTTAAGTC CAGAATTAGA ACAAAAAATA
TCCGATTCCA TCAAACAAAC AGATCATGGG AACTATTTAT CTATTGAACC ACAGGTGACT
CAAAAAATAC AAAAACAACT GAAGAATTAC ACAGAACAAC TTACCCAACA GGGTTTACAG
CCAATAGTGG TTACTTCACC CATGGTGAGA TTGTATTTTA AACGGTTAAC AGAAGGTTTT
TTACCAAATC TGATGGTGGT ATCTTTTCAT GAATTAGATC CTCAAATTGA AGCACAATCT
GTTGGGGTGG TGAATACATA A
 
Protein sequence
MRHVDLIVVL AVIAIVLMLI LPVPPELLDF LLVLNITVAL TILLISMYTL EPLQFSIFPT 
LLLLVTIYRL ALNVSSTRLI LLDAYAGEVI MQFGEFVVGG NPIVGFVIFL ILISIQFIVI
TKGAERVSEV TARFTLDAMP GKQMAIDADL NSGLIDEQQA KERREAVEQE ADFYGAMDGA
SKFVKGDAIA GIVITIINIL GGFVIGMAQQ GMTFQEALQT FTLLTVGDGL VTQIPALLVS
TSTGIVVTRA ASDSNLGQDV VRQILAHPKV LFIVGGVLAA VGAFPGMPPL PFLALGSIMG
FLGFQLRTSL KSEEPTPEEE QAAATEEEAE EYRSPENVMS LLKIDPIEFE FGYGLLPLAD
PDQGGDLLDR VTMIRRQVAM ELGIVVPVIR VRDNIQLSSN EYCIKIKGVE VAKEEVLPNH
YLVMIPGDSS GKPEDLGLEG TETKEPVFGL PALWIDESQR EQAEMSGYTV VDPPSVLATH
LTEIIKQHAH ELLGRQETKE LIDNVKNDYP AVVEELVDNI LNIGEIRKVL ANLLKEGVSI
KNLLTILETL TDYGAVTKDT DMLTEYVRQN LNREITTKLK ELQGEPIKVI TLSPELEQKI
SDSIKQTDHG NYLSIEPQVT QKIQKQLKNY TEQLTQQGLQ PIVVTSPMVR LYFKRLTEGF
LPNLMVVSFH ELDPQIEAQS VGVVNT