Gene Nther_1411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1411 
Symbol 
ID6315743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1479738 
End bp1480511 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content33% 
IMG OID642643791 
Productflagellar biosynthetic protein FliR 
Protein accessionYP_001917582 
Protein GI188586037 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[N] Cell motility 
COG ID[COG1684] Flagellar biosynthesis pathway, component FliR 
TIGRFAM ID[TIGR01400] flagellar biosynthetic protein FliR 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.844633 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.465726 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGATCTGA CAACGTTGTT GCTAGAACAA GGCGTTTTAT TCATATTGTT ATTAACTAGA 
ATATCTGGCA TGATAATGAC AGCACCAATT TTTGGAAGTA ATTATATGCC CAATCAAATT
AAAATAGCCT TTAGTTTAAT ATTGACACTG GTTTTTTTAC CTGTTTTATC TCCTGAAGGT
TTATCTGATT ATCATATCAT GAATGTTATA TTATTTGCTT TTATGGAGTT AATGGTCGGA
ATAGCAATAG GTATGATCGC CAATTTGGTA TTTTCTTCAA TACAAATAGC TGGACAATTA
ATTGATGTAC AAATGGGATT TGCTATGGCT AGGGTGATGG ACCCCCAGTA CGAAACTCAA
GTACCTTTAA TAGGTCAATT TAAATATATT TTAGCTATCA TGATTTTTTT AGTTATAAAT
GGTCATCACT TATTAATTAG ATCAGTTTAT GAAAGTTATC AATTGCTACC TATTGGCAAT
ATATTTGATT TAGGTGCAGG GGGAGTAGCT CTTAATGAAC TGTTCTCCAC AGTGTTTGTT
TTGGCTATTC AGGTGAGTGC TCCCGCTCTT GGTACTTTAT TTTTGACAAA TATAGCTTTG
GGGGTTTTGG CTAGAACTGT ACCCCAAATG AATGTATTTA TTATTGGGTT TCCTGTGAAA
ATTTTTGTAG GATTTCTGTC CCTGGTATTA TTAATGCCTA CTTATACTTT GGTTTTGGGA
AACTTATTTC AGCACATTTG GGATGGTTTA TATAACTTCT TACAAGCTTT ATAG
 
Protein sequence
MDLTTLLLEQ GVLFILLLTR ISGMIMTAPI FGSNYMPNQI KIAFSLILTL VFLPVLSPEG 
LSDYHIMNVI LFAFMELMVG IAIGMIANLV FSSIQIAGQL IDVQMGFAMA RVMDPQYETQ
VPLIGQFKYI LAIMIFLVIN GHHLLIRSVY ESYQLLPIGN IFDLGAGGVA LNELFSTVFV
LAIQVSAPAL GTLFLTNIAL GVLARTVPQM NVFIIGFPVK IFVGFLSLVL LMPTYTLVLG
NLFQHIWDGL YNFLQAL