Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_1406 |
Symbol | |
ID | 6315738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 1476392 |
End bp | 1477660 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 642643786 |
Product | CheC, inhibitor of MCP methylation / FliN fusion protein |
Protein accession | YP_001917577 |
Protein GI | 188586032 |
COG category | [N] Cell motility [T] Signal transduction mechanisms [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1776] Chemotaxis protein CheC, inhibitor of MCP methylation [COG1886] Flagellar motor switch/type III secretory pathway protein |
TIGRFAM ID | [TIGR02480] flagellar motor switch protein FliN |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.545677 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGAGAATA ATAAAGATAT CTTGTCCCAA GAAGAAATTG ATGCTCTGTT AAAAGGATCA GGCGACGATG ATAGTGGCGA TGATGGAGAT AACCATGGTG GTAGTGGCGG CAGCGGATCA GGTAACGATG GCAATGGAGG TAATGGAAAT AATGGAGATA ATGGTGATAA TTCTTTAAAT GAAACTGAAA AGGATACCGT TGGTGAAATT GGAAACATTT CCATGGGGAC TGCTGCTACT ACCTTATCAG TACTACTTAA TCAGAAAGTA TCTATAACTA CTCCAAGAGT TGAAGTGACA GACTATGCCA CTTTAAGAGA AGAATTTCCT AAACCTCATG TAGCAGTAGA AGTGGAATAC TTGGAGGGGC TTGAAGGAAT TAATGTATTA ATCCTAAAAC AAGAGGATGC AAAAATGATT GCCAATTTAA TGATGGGTGG CGACGGTACA GATATTGCTG AAGGTGAAAT CGAGGAATTT CACTTAAGTG CTGTAGGAGA AGCCATGAAT CAGATGATGG GCTCGGCCTC GACTTCCATG TCTGATATGT TTGATAAAAC CATTAATATT TCGCCTCCAA GTGTAAAAAT GCTGGATCTA GGATCTGAAG AAGCCCTAGA AGAACTTCCA AAAGAGCCCA TGATTAAAGT TGCATTTGAT TTAAAAATCG GTGATTTAAT TGATAGCGAA ATCATGCAGT TAATACCCTT TGAATTTGCT AAAGATATGG TAGTTTCTTT AACTGGAGAT AGTGCAGAAG AAGTTTCAGC AGGTCAACAA GAAATGGCTG CAAGTTCCGA AGGAACAGCA GCTGCAAAAC CCCAAGCTCC GACTCAAACT GGTCCTGGGC CAGAATCTGG TCAATCGCCA GAAAGGGAGG TGTCTACACA AGGACAACCA ACAGGACAAG GAGAGCAACA AATGAAACAA GAGCAACAGC CAAAGAAAGA CTATCAACCT GTAGAATTTT CGCCTTTAGA AGGTCATCAA TCGGCTGCCA AAGGAGAAAA TTCCAATATT GAATTGATAA TGGATGTTCC TCTGGAAGTA ACGGTTGAAC TGGGACAAAC CAAGAAAAAA ATCCAAGAAA TATTGGAATT GGTTCCAGGA TCTATTATAG AACTGGATAA AATTGCCGGG GAGCCAGTTG ATATAAAAGT TAATGGGAAA TTAATCGCTA AAGGGGAAGT AGTTGTAATC GATGAGAACT TCGGTATCAG AATTACCGAA ATAATTAGTC CGGTGGAGAG GATTAACAAA CTTCAGTAA
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Protein sequence | MENNKDILSQ EEIDALLKGS GDDDSGDDGD NHGGSGGSGS GNDGNGGNGN NGDNGDNSLN ETEKDTVGEI GNISMGTAAT TLSVLLNQKV SITTPRVEVT DYATLREEFP KPHVAVEVEY LEGLEGINVL ILKQEDAKMI ANLMMGGDGT DIAEGEIEEF HLSAVGEAMN QMMGSASTSM SDMFDKTINI SPPSVKMLDL GSEEALEELP KEPMIKVAFD LKIGDLIDSE IMQLIPFEFA KDMVVSLTGD SAEEVSAGQQ EMAASSEGTA AAKPQAPTQT GPGPESGQSP EREVSTQGQP TGQGEQQMKQ EQQPKKDYQP VEFSPLEGHQ SAAKGENSNI ELIMDVPLEV TVELGQTKKK IQEILELVPG SIIELDKIAG EPVDIKVNGK LIAKGEVVVI DENFGIRITE IISPVERINK LQ
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