Gene Nther_1390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1390 
Symbol 
ID6314607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1462406 
End bp1462696 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content37% 
IMG OID642643770 
Productflagellar hook-basal body complex subunit FliE 
Protein accessionYP_001917561 
Protein GI188586016 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.852858 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATAG AAGGTATTGG TGAAAACACT GTAAATCCTA TTAATCAAGG AAATAAACAA 
AAGGCAGAGG ACTTAAATTT TAGAGAGTTT TTGTCTGACG CCATTTCTAA GGTGGATGAC
ATCCAAAAAG AGAGTGAGGT GCTCAATCAA AAGCTAGCCG TTGGAGAAGT AGATAACCTT
CATGATGTGG TGATTGCCAC TGAAAAAGCC GAGTTAGCTC TCAACTTAAC TTTAGAAGTT
AGGAATCAAC TCATAGAAAC CCATGACGAA TTAATGCGGA TGCAAATATA A
 
Protein sequence
MRIEGIGENT VNPINQGNKQ KAEDLNFREF LSDAISKVDD IQKESEVLNQ KLAVGEVDNL 
HDVVIATEKA ELALNLTLEV RNQLIETHDE LMRMQI