Gene Nther_1374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1374 
Symbol 
ID6315687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1444452 
End bp1444970 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content34% 
IMG OID642643754 
Productsignal peptidase I 
Protein accessionYP_001917545 
Protein GI188586000 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000766434 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.363183 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACAA ACAAATCACG AGAAGTATTT GAATGGATAA AATCATTAGT AGTAGCTGTT 
TTACTTGCTT TGCTTATCAG ATATTTCGTT GTAGAAATTT TTTTAGTAGA GGGACAATCC
ATGTATCCTA CCTTGGAGAA TTCCCAGCGC TTGATAGTGA ATAAATTTGT GTACCGTTTT
AGAGAACCTG ATCGAGAAGA TGTAATAGTT TTTGAATACA GTGATGATAA AGATTTTATT
AAACGAGTAA TTGCTCTTCC AGGAGAAGAA ATTAAAATAT CTGAAGGACA AGTATATATA
GATGGTGACC CTCTTGACGA GTCTGAATAT GAAACAAAAA AAATTAATGA TAATTACGGT
CCTGAAGCAG TACCCGAAGA TAAATATTTT GTCTTGGGAG ATAATCGCGA TAATAGTATG
GACAGCCGCT CTGACTCAGT TGGGTTTATC CATGAAGATA AGATAAAGGG AAAAGCTTTT
TTAATCTTTT GGCCTTTAGA TGATGTTGGG AGTATATAA
 
Protein sequence
MTTNKSREVF EWIKSLVVAV LLALLIRYFV VEIFLVEGQS MYPTLENSQR LIVNKFVYRF 
REPDREDVIV FEYSDDKDFI KRVIALPGEE IKISEGQVYI DGDPLDESEY ETKKINDNYG
PEAVPEDKYF VLGDNRDNSM DSRSDSVGFI HEDKIKGKAF LIFWPLDDVG SI