Gene Nther_1368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1368 
Symbol 
ID6315681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1440694 
End bp1442037 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content38% 
IMG OID642643748 
Productsignal recognition particle subunit FFH/SRP54 (srp54) 
Protein accessionYP_001917539 
Protein GI188585994 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0541] Signal recognition particle GTPase 
TIGRFAM ID[TIGR00064] signal recognition particle-docking protein FtsY
[TIGR00959] signal recognition particle protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000018858 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.195447 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCAAA GACTATCAGA AAAATTACAG GATACCTTTG GCAAACTGAC AGGAAAAGGT 
AAAGTCAACG AAAAAGACGT TAAAGAAGCC ATGAGAGAAG TTCGTCTGGC CCTTCTAGAA
GCCGACGTTA ACTATAAAGT AGTTAAAGAG TTTGTCAATA ATGTTAAAGA AAGAGCTGTT
GGGGAAGAAG TATTAGAAAG TTTAACTCCG GGTCAACAAG TGATCAAAAT TGTCCGGGAT
GAATTAACAC AATTAATGGG TGGAGAAGTT AGCGAAGTAA ACTTTTCTGA TCAACCTCCA
ACTGTTATTA TGCTTTCTGG TTTGCAAGGT ACTGGAAAAA CCACGGCATC TGCTAAGCTG
GCTAAAAAAT TTAAAAAAGA TGGCAAAAAT CCATTGATGG TTGCCTGTGA TACCCAACGT
CCAGCTGCAA TTAAACAGTT ACAAGTTTTA GGAGAACAAA CTGATATCCC TGTTTTCAGT
ATGGGAGATA AACAGCACCC AGCTGATATA GCTAAAGGTG CTGTGGAACA TGCTAAAAAA
AATCAGATGG ATGTTGTTAT TTTAGATACA GCTGGTAGAT TGCATATTGA TGAAGATCTA
ATGACAGAGT TGCGTGAGGT TGAGAGCAGT GTCGAGCCTC ATGAAATCTT ACTAGTTGTA
GATGCTATGA CAGGTCAGGA TGCAGTCAAT GTTGCCGAAA GATTTGATCA GGATTTAGAT
TTATCTGGAA TAGTAATGAC TAAGCTTGAT GGAGATACCA GGGGCGGAGC AGCGCTCTCA
GTCAAAAAAG TCACTGGAAA ACCAATTAAA TTTATTGGTA CAGGGGAAAA AGTTGATGAA
TTAGAAGTTT TCCATCCTGA TCGATTGGCT TCTAGAATTC TGGGCATGGG AGATGTAATG
TCTCTGATAG AAAAAGCTGA AACTAGTATG GACCAGAAAA AAGCCCAAGA ACTGGAAAAG
AAAATTAAAA GCCAGTCTTT TACCTTCGAA GATTTTTTAG AGCAGCTACA ACAATTGAAG
AGCATGGGTC CTTTGGACCA AATTATGGAT ATGATGCCTG GTATGGCAGG TAACAAAAAG
ATGAAAAATT TCTCTGTAGA TGAACAAGAA CTAGTTAAAA TTGAAGCTAT TATTCAATCA
ATGACTCAAG AAGAACGTGT TAAACCTGAA GTAATTAATA GCAGTAGAAA AAAACGTATA
GCCAAAGGAA GTGGAACCAG AGTCCAAGAT GTCAACAAAC TTCTGAAGCA ATTTGAGCAA
ATGAAGAAAA TGATGAAACA AATGGGTAAA ATGGGTAAAA AGAAAATGCC GGGAAAAATG
GGGAACAATC TTCCCTTTAT GTAA
 
Protein sequence
MLQRLSEKLQ DTFGKLTGKG KVNEKDVKEA MREVRLALLE ADVNYKVVKE FVNNVKERAV 
GEEVLESLTP GQQVIKIVRD ELTQLMGGEV SEVNFSDQPP TVIMLSGLQG TGKTTASAKL
AKKFKKDGKN PLMVACDTQR PAAIKQLQVL GEQTDIPVFS MGDKQHPADI AKGAVEHAKK
NQMDVVILDT AGRLHIDEDL MTELREVESS VEPHEILLVV DAMTGQDAVN VAERFDQDLD
LSGIVMTKLD GDTRGGAALS VKKVTGKPIK FIGTGEKVDE LEVFHPDRLA SRILGMGDVM
SLIEKAETSM DQKKAQELEK KIKSQSFTFE DFLEQLQQLK SMGPLDQIMD MMPGMAGNKK
MKNFSVDEQE LVKIEAIIQS MTQEERVKPE VINSSRKKRI AKGSGTRVQD VNKLLKQFEQ
MKKMMKQMGK MGKKKMPGKM GNNLPFM