| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1363 |
|---|
| Symbol | |
|---|
| ID | 6314537 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | + |
|---|
| Start bp | 1434493 |
|---|
| End bp | 1435185 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 642643743 |
|---|
| Product | Ribonuclease III |
|---|
| Protein accession | YP_001917534 |
|---|
| Protein GI | 188585989 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0571] dsRNA-specific ribonuclease |
|---|
| TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0000482904 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 0.16151 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTAAGG AATGCCGCGA TATTGTTGAA CTAAAAGAAA AGTTAGGTAT TTATGTGGAT
GATAAGTTAC TACTACAAGC AGTGACTCAT ACTTCCTATG CCCATGAACA AAAAGATGTT
GTTGATCACA ATGAAAGGCT TGAGTTTTTA GGAGATGCTG TTTTAGAACT GGCAATCAGC
GAAACATTAT ATAAAAAATA CCCTGAGCTA CCTGAGGGTG AGCTTACCAA ATTAAGAGCA
GAGTTAGTGT GCGAATTATC TTTAGTTAAA ATTGCAGAAA AATTAGATCT GGGAAAATAT
TTAAGGTTAG GCAAAGGCGA GGATAGTACT GGAGGAAGAG ACCGGCGTTC TACCCTGGCA
GATACAGTTG AAGCTTTAAT TGGAGCTGTT TACTTACAAA CAAATTACGA TCAAACGAAA
CAACTGATTC TTGACTTATT TAAAGATCAA TTAAGTCATA TTGATAATCA ACGGATTGGT
GATTATAAAA CTATGATACA AGAATTAGTA CAGGATAGAT ATGGTGATCC ACCTAAATAT
CAAATTGTTA AAGAATCGGG TCCAGATCAT GACAAGAGTT TTGTTGCTGA AGTCCAAATT
AACAATGAAG TCGTGGGTAG AGGCAGTGGT AAAAGCAAAA AAGAGGCAGA ACAGAATGCG
GCTCATTTTG CTTTTCAAAA ATTAAGTAAA TAA
|
|---|
| Protein sequence | MGKECRDIVE LKEKLGIYVD DKLLLQAVTH TSYAHEQKDV VDHNERLEFL GDAVLELAIS
ETLYKKYPEL PEGELTKLRA ELVCELSLVK IAEKLDLGKY LRLGKGEDST GGRDRRSTLA
DTVEALIGAV YLQTNYDQTK QLILDLFKDQ LSHIDNQRIG DYKTMIQELV QDRYGDPPKY
QIVKESGPDH DKSFVAEVQI NNEVVGRGSG KSKKEAEQNA AHFAFQKLSK
|
|---|
| |