Gene Nther_1357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1357 
Symbol 
ID6314531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1429161 
End bp1430150 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content39% 
IMG OID642643737 
Product3-oxoacyl-(acyl-carrier-protein) synthase III 
Protein accessionYP_001917528 
Protein GI188585983 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value9.32091e-06 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.0308993 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAATG CGAAAATACT GGCCACAGGA AAAAGTGTAC CTGATTCAAT TTTCACCAAT 
GAAGATTTGG AGAAGATGGT GGAAACCAGT GATAGTTGGA TCACATCAAG AACAGGCATC
AAGGAACGTA GGATTGCAGA TGAAAACACA GCTACGTCTC ATTTGTCAGT ACAAGCGGCC
GAAATAGCTT TGAACAAATC TGGAATTGAA CCAGCCGATT TGGATATGAT CATTGTAGCT
ACGGTTACTC CTGACATGGC TTTCCCTTCT ACGGCTTGCC TTGTTCAAGA TAAATTAGGA
GCTGATCAAG CATGTGCATT TGACTTGGAA GCTGCCTGTA CAGGCTTTTT GTATGGATTG
CGGATAGCCA GTCAGTTTAT AGCTACTGAT ACCCATAAAT ATATCTTGGT TATAGGATCA
GAAACCCTGT CCAAAATTGT TGATTGGGAA GATAGAAACA CCTGCGTTCT TTTTGGTGAT
GGAGCCGGCG CAGCAGTACT TGGCCCTGTA GAGAATGGTG AAGAAGACAA AGGTTTGATC
TCTTTTGATT TAGGTGCTGA TGGCTCCAAG GGGGAATTAT TGCAGCAACC TGCAGGAGGT
TCCTTAAAGC CGGCTACATT AGAAACAGTT AGTAGTAAAG AGCATTTTAT CAAAATGAAT
GGAAATGAAG TCTTTAAATT TGCTGTGAAA GTTATTGGTG ATACAACGGA AAAGGCTTTG
AAAAAAATTG ACAAAACAAC TGAAGATATT GATTTATTTA TTCCTCATCA GGCAAATCAG
AGAATTATTG ATTCCGCTAC TAATCGTCTT GGTATAAGTA AGGAGAAAAC TTTTGTTAAT
CTACAAAATT ATGGAAATAT GTCAGCAGCT TCGATTCCGG TTGCTTTAGA TGAAGCTATT
GAAGAAAATT TAATAAAGGA AGATGACTTG GTTGCCTTAG TAGGTTTTGG TGGAGGTTTG
ACCTGGGGCT CTTGTCTCAT TAAATGGTAG
 
Protein sequence
MSNAKILATG KSVPDSIFTN EDLEKMVETS DSWITSRTGI KERRIADENT ATSHLSVQAA 
EIALNKSGIE PADLDMIIVA TVTPDMAFPS TACLVQDKLG ADQACAFDLE AACTGFLYGL
RIASQFIATD THKYILVIGS ETLSKIVDWE DRNTCVLFGD GAGAAVLGPV ENGEEDKGLI
SFDLGADGSK GELLQQPAGG SLKPATLETV SSKEHFIKMN GNEVFKFAVK VIGDTTEKAL
KKIDKTTEDI DLFIPHQANQ RIIDSATNRL GISKEKTFVN LQNYGNMSAA SIPVALDEAI
EENLIKEDDL VALVGFGGGL TWGSCLIKW