Gene Nther_1356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1356 
Symbol 
ID6315605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1428143 
End bp1429168 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content38% 
IMG OID642643736 
Productfatty acid/phospholipid synthesis protein PlsX 
Protein accessionYP_001917527 
Protein GI188585982 
COG category[I] Lipid transport and metabolism 
COG ID[COG0416] Fatty acid/phospholipid biosynthesis enzyme 
TIGRFAM ID[TIGR00182] fatty acid/phospholipid synthesis protein PlsX 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.76172e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.0340376 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAGAG TAGCTTTAGA TGCTATGGGT GGAGATCATG CCCCAAAAGC GCCTGTGAAA 
GGTGCTTTGT TAGCTGTACA AGAGTTACAA GAAATTTCGA TTTCTCTTGT CGGTCAAAAA
GAATTAATTG AACAAGAACT TTCTCGAATA AAAAGCGAAG ATTTTGATGA TGATAACATA
CATATAGTTG ATGCACGGGA AATAATATCA GGTGAAGACA ATCCAACTCA AGCAATTAGA
GAAAAAAAAG ACTCCTCCTT AGTAAAGGCC ATGAACTTAT TAAAAGATAA TCAAGTAGAA
GCTGTAGTTA GTGCTGGAAA TACCGGGGCG TTTATGGCTG GAGGGTTGCT CAAACTCGGA
AGACTAGCAA ATATCAAAAG GCCTGCTTTA GCACCTGTTT TTCCAGCTTT TGATGGAAAT
GGGACTGTTG TATTAGACGT TGGTGCTACT ATGGATCCTA AACCAGAACA CTTAAAAGAT
TTTGCAATTA TGGGAAGTGT TTATGCAGAA AAAGTACTTG GTCGTGAACG ACCACGGGTG
GGACTAATAA ATGTAGGTGA AGAAGCAGGT AAAGGTAATC AACTTACTAA GGAAAGCTAT
AGTTTATTAG AGACTGCTCC TATTAACTTT TGTGGTAATG TGGAAGCCAG GGAATTGTTA
TCAGGTGATT TTGATGTGGT TGTATGTGAA GGTTTTATGG GAAATGTACT TCTCAAATTT
ATGGAAGGCA TAGGAAAAGG ACTTTTTGGG ACAATGAAAG ACGAATTTAC TGCGGATTTT
AAGAGTAAAC TTGGAGCTTG GATGTTAAAA CCTCGTATGA AGTCTCTTAA AAGTAGATTT
GATTACAATG AGTATGGAGG AGCACCTTTT CTAGGAGTGA ACGGAATTCT TGTGAAAAGT
CACGGTTCCT CCAATGAAAC CGCCATTAAA AATGCTATTG TGCGCCAAGT ATATCATTTT
GTCAATAACG AAGTTTTGAC GGCTTTTTCA CAGGAAATAG AGAAAGGGGT AGAAACTGAT
GAGTAA
 
Protein sequence
MIRVALDAMG GDHAPKAPVK GALLAVQELQ EISISLVGQK ELIEQELSRI KSEDFDDDNI 
HIVDAREIIS GEDNPTQAIR EKKDSSLVKA MNLLKDNQVE AVVSAGNTGA FMAGGLLKLG
RLANIKRPAL APVFPAFDGN GTVVLDVGAT MDPKPEHLKD FAIMGSVYAE KVLGRERPRV
GLINVGEEAG KGNQLTKESY SLLETAPINF CGNVEARELL SGDFDVVVCE GFMGNVLLKF
MEGIGKGLFG TMKDEFTADF KSKLGAWMLK PRMKSLKSRF DYNEYGGAPF LGVNGILVKS
HGSSNETAIK NAIVRQVYHF VNNEVLTAFS QEIEKGVETD E