| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1290 |
|---|
| Symbol | |
|---|
| ID | 6315183 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | + |
|---|
| Start bp | 1361704 |
|---|
| End bp | 1362324 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 642643669 |
|---|
| Product | beta-lactamase domain protein |
|---|
| Protein accession | YP_001917461 |
|---|
| Protein GI | 188585916 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.00903792 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 79 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATTATTG AGCAATTAGT TGTAGGTGAA TTAGGTGCTA ACTGTTATAT TGTCGGTTGT
CAGGAAACCG GTGAAGCAGT GATTATTGAT CCAGGCGGGA ATGGTGAAAA AATCCACCAA
CAAATCAAAG AGTTAGATAT GACTCCCTCT ATGATAATTA ACACTCATGG TCATGTCGAT
CATATTGGGG CTAATTCATA TTTAAAAGAA CACACTGATG CCGAATTGGG GATTCATCCC
AAAGATGCTC CAATGCTAAC TGACCCCAAA CTTAATTTGT CCATGTTCAC TGGAAAAGAG
ATTATTAGTC CGTCAGCAGA TATACATTTA AATGACGGTG ATTCTATAAA AGTAGGAAAT
TTAAAAGGAG AAATAATCAA TACTCCAGGT CATACTCCAG GAGGAATATG TATTAAAATT
GATAATAATC TGTTCTCTGG TGACACCCTA TTTACTGAAG GGATAGGCCG TTGTGATTTA
CCGGGTGGAA ACCAAGATGA ATTACTTAAA TCCATAAGAG AACAGCTGTT CACACTTTCC
GATGATCTTG TTGTATATCC AGGGCACGGA GGAAGCACTA CCATTGCTCA TGAGAAAAGA
AAAAATCCTT TTCTTAAATA A
|
|---|
| Protein sequence | MIIEQLVVGE LGANCYIVGC QETGEAVIID PGGNGEKIHQ QIKELDMTPS MIINTHGHVD
HIGANSYLKE HTDAELGIHP KDAPMLTDPK LNLSMFTGKE IISPSADIHL NDGDSIKVGN
LKGEIINTPG HTPGGICIKI DNNLFSGDTL FTEGIGRCDL PGGNQDELLK SIREQLFTLS
DDLVVYPGHG GSTTIAHEKR KNPFLK
|
|---|
| |