| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1215 |
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| Symbol | |
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| ID | 6316840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | + |
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| Start bp | 1288374 |
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| End bp | 1289456 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 642643588 |
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| Product | RNA polymerase, sigma 70 subunit, RpoD family |
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| Protein accession | YP_001917386 |
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| Protein GI | 188585841 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000000256701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.00656648 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAGAGA AAAATCAAAA CCAAAAATTA GAACAAATTA AAGATGAACT GTTAAAAGTG
GGAAAAGAAC GAGGATTTCT CACCTATAAA GAAATTATGG ATCAGTTGTC AGAATTCCAG
CTTTCCAGCG ACCAAATAGA TGAATTTTAT GAAGTACTGA CTCAGGCCGG TATAGATGTG
GTGGATGCTA TTGGAGAGGT GGATCCAGAT GACCCCACAA AAGCGGAGCT GGACTTATCA
CTTCCTGAAG GGGTAGAAGT AAGTGATCCG GTACGTATGT ACTTAAAAGA GATCGGAAAA
ATCCCCCTTC TATCTCCCGA CGACGAAATA GAACTTGCCA AGAAAATTGA AGAGGGAGAT
GAAGGAGCTA AAAGAAAATT GGCTGAAGCC AATTTACGCT TAGTGGTCAG TATTGCTAAA
AAATACGTTG GTCGCGGGAT GTTATTTCTG GACTTGATTC AAGAAGGTAA TTTGGGACTG
ATAAAAGCAG TAGAAAAATT TGATTACCGA AAAGGTTACA AGTTTAGTAC TTATGCTACA
TGGTGGATAC GTCAAGCAAT TACAAGGGCC ATAGCAGATC AAGCTAGGAC TATTAGAATA
CCTGTCCATA TGGTGGAAAC TATCAATAAA TTGATTAGAG TTTCGCGTCA ACTCGTACAG
GAACTGGGTA GGGAACCTTT ACCTGAAGAA ATTGCAGAAC AAATGGATAT GAGTGAAGAC
AAGGTCAGGG AAATCTTAAA AATTGCCCAG GAACCCGTAA GTTTAGAGAC TCCTATAGGA
GAAGAGGATG ACAGTCACTT AGGAGACTTT ATAGAAGACC AGGATGCTAA ACCACCTGCA
GATGCTGCTG CTTTTGAACT TCTTAAAGGA CAATTAGAAG AAGTATTGGA TAGTTTAACA
CCCCGTGAGC AAAAAGTATT GAGACTTAGA TTTGGATTAG ATGACGGAAA AACTCGAACT
CTAGAAGAGG TGGGTAAACA CTTTGGTGTC ACTAGGGAAA GGATTAGACA AATAGAAGCT
AAAGCCTTGC GTAAATTACG TCACCCTATG AGAAGTAAAC GCCTTAAGGA TTACTTAGAT
TAA
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| Protein sequence | MAEKNQNQKL EQIKDELLKV GKERGFLTYK EIMDQLSEFQ LSSDQIDEFY EVLTQAGIDV
VDAIGEVDPD DPTKAELDLS LPEGVEVSDP VRMYLKEIGK IPLLSPDDEI ELAKKIEEGD
EGAKRKLAEA NLRLVVSIAK KYVGRGMLFL DLIQEGNLGL IKAVEKFDYR KGYKFSTYAT
WWIRQAITRA IADQARTIRI PVHMVETINK LIRVSRQLVQ ELGREPLPEE IAEQMDMSED
KVREILKIAQ EPVSLETPIG EEDDSHLGDF IEDQDAKPPA DAAAFELLKG QLEEVLDSLT
PREQKVLRLR FGLDDGKTRT LEEVGKHFGV TRERIRQIEA KALRKLRHPM RSKRLKDYLD
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