Gene Nther_1193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1193 
Symbol 
ID6316505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1262662 
End bp1264038 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content39% 
IMG OID642643566 
Productprotein of unknown function DUF107 
Protein accessionYP_001917364 
Protein GI188585819 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1030] Membrane-bound serine protease (ClpP class) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0874985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.16265 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTGCGTA AAAACTTTAA TATTTTCTGT TCATTCATAT GTGTTTTACT GATTTTCAGT 
GGTTTATTTA TTCACTTTGA AGAGGTTCAG GCACAGTCAT TAGCTGATAC CGGAGAAAAA
ACTGTTTACC AAGTTCCTGT AGAAGGCAAT ATAGAACGAG GATTATCTGC CTTTTTGAAC
AGAGCTTTTG AAAGTGCCCA AGAAGAAAAT GCAGATCTAA TTGTTTTAGA TATAAATACT
CCTGGAGGGG CATTAGATGC TTCTTTTGAG ATTAAAGATT TAATAGTCAA TGAAGAAATA
CCAGTTTATG CTTTTGTTAA TTCCCAGGCA ATATCAGCTG GTTCATACCT TGCCTTAGCT
TCTGATGAAA TTTACATGAG ACCAACTGGT ACCATGGGTG CTGCTGAAGC GCGTATGGGG
ACTGAAGTAG CCGATGAGAA AGTGATGAGT GTATGGGAAA CGGAAATGAG AACTGTGGCC
AAGGAAAGGG ACCGTGATCC TGACATAGCT GCAGCCATGG TTCGGCGTGA AATGGAGATA
GAAGGTCTGG TATCAGAAAA TCAACTATTA ACTTTAAGTG CGGAAGAAGC CAAGGAACAT
GGTATGGCAG AAGGAATTGT AAATAATTAC GACGAATTAC TGGAAAAAAC CGGTTACGAA
GGTGCAAATA TAGTGGAATA TCCCATGGAA TGGGCTGAAC GAATGGCTCG GTTTTTTACC
TCACCTGCTG TGGCTTCAAT TTTATTAACT TTAGGAATGG CCGGACTTGT TATTGAACTA
TCTTCACCAG GATTAGGATT GCCTGGATTG GTTGGACTTC TATGTTTTGG GTTGTTCTTT
GGAGGACATA TCTTTGCAGG TTTGGCTGGT TATGAAGTAC TGCTATTCTT TATAGTGGGA
ATAATTTTAT TATTAATAGA AGCCATTGCT GCTGGGTTTG GTGTTATGGG GCTTGCAGGG
ATTGTATCAT TCGGTTTTGC CATAGTAATA TCGGCAGAAA GTACAGAACA AGGCTTAATG
ATGTTACTGT ATAGTTTACT GGGTACTATT ATAGTTCTAG TGATTGCCTT TAGGTATTTT
GTTAGAAGTA GATTTTGGGA TAGAATTATA TTAAACCATT CTGAAAGTAA AGACCAGGGT
TATGTAGGTA CGAATACTGA ATATAAAAAT TTAGTAGGTG AATCAGGTGT TACGGAAGGA
CCTTTAAGGC CGGCTGGAAC AGCCCAAATC TCGGGTGAAA GAATAGATGT AATCAGTGAA
GGGGGGTATA TACCAGAAGG GACTCCTGTA CAAGTGTCTA AAGTTGAAGG CTCAAGAGTG
ATTGTCAAAG AAATCAAATC AGAAGAAAGT GATCAGAAGG AGGAGGATAC TGAATGA
 
Protein sequence
MVRKNFNIFC SFICVLLIFS GLFIHFEEVQ AQSLADTGEK TVYQVPVEGN IERGLSAFLN 
RAFESAQEEN ADLIVLDINT PGGALDASFE IKDLIVNEEI PVYAFVNSQA ISAGSYLALA
SDEIYMRPTG TMGAAEARMG TEVADEKVMS VWETEMRTVA KERDRDPDIA AAMVRREMEI
EGLVSENQLL TLSAEEAKEH GMAEGIVNNY DELLEKTGYE GANIVEYPME WAERMARFFT
SPAVASILLT LGMAGLVIEL SSPGLGLPGL VGLLCFGLFF GGHIFAGLAG YEVLLFFIVG
IILLLIEAIA AGFGVMGLAG IVSFGFAIVI SAESTEQGLM MLLYSLLGTI IVLVIAFRYF
VRSRFWDRII LNHSESKDQG YVGTNTEYKN LVGESGVTEG PLRPAGTAQI SGERIDVISE
GGYIPEGTPV QVSKVEGSRV IVKEIKSEES DQKEEDTE