| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1181 |
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| Symbol | |
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| ID | 6315803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | + |
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| Start bp | 1252629 |
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| End bp | 1253660 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 642643554 |
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| Product | heat-inducible transcription repressor HrcA |
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| Protein accession | YP_001917352 |
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| Protein GI | 188585807 |
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| COG category | [K] Transcription |
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| COG ID | [COG1420] Transcriptional regulator of heat shock gene |
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| TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.00891806 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCTTA ATTGGCGTAA GCAAAAAATT TTAAAGACTA TTATTTCAGA TTATATTAAA
CGTGCAGAAC CCGTCGGGTC TAGAACCCTG ACAAAAAGAT ATGAATTTGA TTTAAGTCCC
GCTACTATCA GAAATGAAAT GGCAGACTTA GAAGATATGG GCTTTTTGGA GCAACCGCAT
ACTTCAGCCG GGCGTATTCC TACGGAAAGA GGATATCGTT TCTTTGTTGA TGAGTTGATA
ACTCGCTGTT TATCAGTTCC ACAGCAAGAG TTGCTCTTAA AAAAATTAAC CAAATTCAAG
GCTCTAGAAA TAAATGAAAT AGTGCAAGTA ACAGCTCGGG CTCTGGCTGA AATGACAGAT
TATACTTCTT TAGTTTTAGG TCCGCAAACA AGTAAAAGTG CTTTTCAGGA AATTCAAGTT
TTTCCTATTG ATCAACAAAG GGTATTAATG GTTCTAACAA CAGATACAGG AATTATAGAA
AGCAAACCGG TGCCAGTTTC TGGTAACTTA TCAAAACAAG AGCTTAGTAA CATAGTTCAA
CATCTAAACA AACGACTGAA AGGTTTAACT ATAGATGATA TCACCCCTAG CCTATTAAAG
GAGTTGCGGA CAGATTTAAT TAAAGAAGTG GATTTAGTGG AAAAAGCCAT GCATATCTTG
GCTGATTCCT TTAGACACAG TAGTGCCAAC GTGGCTTTAG GCGGGACAAA GAATATTTTA
AATCAGCCTG AATTTAATGA TCTTAAAAAG GTGAAAGAGT TACTATCATT TTTTGAGAAT
GAAGAGGTCT TGGCTGAATT GCTTTCTGAA TCGGAAGGCA TTGTTGTGCG AATTGGGAAG
GAAAACCCCA GGGATGAAGT GAAAGATTGC AGTCTAGTAA CTGCTAGTTA CGAATTAAAT
GGACGCCCCC TGGGTACTAT AGGTGTTTTA GGTCCTACCA GGATGGATTA CTCCAGGGTG
ATTGCCATAG TGGCTCAAAT TGCCAATGAA CTTACAATGG CATTGGATAA AAAGAAAATT
ACTGAGGAGT AG
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| Protein sequence | MSLNWRKQKI LKTIISDYIK RAEPVGSRTL TKRYEFDLSP ATIRNEMADL EDMGFLEQPH
TSAGRIPTER GYRFFVDELI TRCLSVPQQE LLLKKLTKFK ALEINEIVQV TARALAEMTD
YTSLVLGPQT SKSAFQEIQV FPIDQQRVLM VLTTDTGIIE SKPVPVSGNL SKQELSNIVQ
HLNKRLKGLT IDDITPSLLK ELRTDLIKEV DLVEKAMHIL ADSFRHSSAN VALGGTKNIL
NQPEFNDLKK VKELLSFFEN EEVLAELLSE SEGIVVRIGK ENPRDEVKDC SLVTASYELN
GRPLGTIGVL GPTRMDYSRV IAIVAQIANE LTMALDKKKI TEE
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