| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1172 |
|---|
| Symbol | |
|---|
| ID | 6315306 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | + |
|---|
| Start bp | 1241805 |
|---|
| End bp | 1242263 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 642643545 |
|---|
| Product | RNase HI |
|---|
| Protein accession | YP_001917343 |
|---|
| Protein GI | 188585798 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0328] Ribonuclease HI |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000000482938 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.000107341 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACTAATA CAAATGAAGA CAAGAAAAGA GTTACGATTT ATACCGACGG AGCTTGCAGT
GGCAACCCTG GTCCGGGTGG TTGGGGTGCT ATTTTGCTTT TTAATGAACA TAAAAAGGAA
TTATCAGGTT CTGCGGAGAA TACTACCAAT CAAAGAATGG AATTATATGC CGCAGTGCAG
GCTCTGAAAG CATTGAAGTA CCCGTGTAAT GTGGAGCTAT GTAGTGATAG CGCATATTTA
GTTAATTGTT TTCAACAGGG CTGGTGGAAG AAGTGGCAGC GCAATAATTG GTTAACTAAA
TCAAAGAAAA AAGTGGATAA TCAGGATTTA TGGAGAGAAC TCATTGAATT AAATGATTAT
CACTCAATTC AATGGATTAA GGTTAAAGGT CACAGCGATG ATGAACTTAA TAATCGAGCT
GATCAATTGG CAACGGAAGC AATTCCTGAC AAGAGTTAA
|
|---|
| Protein sequence | MTNTNEDKKR VTIYTDGACS GNPGPGGWGA ILLFNEHKKE LSGSAENTTN QRMELYAAVQ
ALKALKYPCN VELCSDSAYL VNCFQQGWWK KWQRNNWLTK SKKKVDNQDL WRELIELNDY
HSIQWIKVKG HSDDELNNRA DQLATEAIPD KS
|
|---|
| |