| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1171 |
|---|
| Symbol | |
|---|
| ID | 6315305 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | + |
|---|
| Start bp | 1240339 |
|---|
| End bp | 1241709 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 642643544 |
|---|
| Product | putative component of D-ornithine aminomutase |
|---|
| Protein accession | YP_001917342 |
|---|
| Protein GI | 188585797 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01319] conserved hypothetical protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000000333128 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.0000285962 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGGACAGG AAAAACTAGT AGCAGAAGTC GGCAGTACTA CTACAGTTGT TTCAATGTAT
AATGAGAAGG GAAAGCTAGT AGCGCAAGGA CAAAGTTCTA CTACTGTTGA AGCAGGAGAT
GTCCTCCTGG GCTTGAATCG AGCCCAGGAG GATTTAAAAC AACAACTGGA CCAAAATGGA
AGCTTCTCTG GATCTTTAGA TGATTTAGAA ATGTATGCTA CTAGCAGTGC CGCTGGTGGT
TTAAAGATGA CAGTTCACGG TCTGGTTTAC GATATGACAG CCCGTGCTTC TAGAGAAGCT
GCATTAGGGG CAGGTGCCGT TATTCACCAA GTTACCGCCG GTGAATTATC CCAAGAAGAT
ATAGATAACA CTTTGGAGAT TTCACCAAAT ATTATTTTAC TGGCCGGTGG GGTGGACTAC
GGAGAAGAAA AAACTGTGGT AAATAATGCC CGTTATATAG CAGACAGTGG CATAAAAGCT
CCTATAGTTT ATGCTGGTAA TGTAGCTTGT CAGGAAAAAG TGGTTAAAAT TTTAGAATCT
GCAGGCCTTT ATGTGAAAGC TGTTGAAAAC GTTTATCCTA CCGTTGACGA GTTAAACGTG
GAACCAGCCC GGAAAGCAAT ACAACAAATT TTCCAAAGCC ATATTGTGCA TGCTCCTGGA
ATGGAAAAAA TTAAAGAAAG AGTTAATGGA AGTATTATGC CAACTCCAGG AGCTGTAATG
GAAGGAGCCA AACGGGTAGC TGATAAAATA GGTGATGCTA TGGTTATTGA CGTAGGTGGT
GCTACTACCG ATGTCCACTC AGTTACAGAT GGTTCGCAAG AAATGCTCGA CTTGACTGTG
GCACCTGAAC CCAGGGCTAA AAGAACGGTA GAAGGTGACT TGGGTGTTTA TAGAAATGCT
AAGAATTTGA TTGATTTAAT GGACGAATCA TATTTTGAGT CGGGGATGAG CCAAGAAGAT
ATGTTAAATA TCATTGCCGA CTGGGAACCT TTTCCACAGA ATGAATCGGA AAAACATCTA
TTACAATTGT TTGCAAAAAT AGCTACCTTC ACAGCAGTAG ATAGACATGC CGGAGCTATA
AAATATCTCT ATGGGCCCAC AGGACGTCAA AAGATAGTTA AAGGGAAAGA TTTAACTAAA
ATTAGATATG TGATTGGCAC TGGAGGAGCC TTAGGTAGGA GTAAACCTGG AGAAAAGGTT
ATAAAAGAGT TATTAAAACG TTATCAACCA AGCAAATTAA CACCTCCAAA AGATGCGCAA
TTAATACTGG ATAGTAACTA TAGCTTGGCA GCTATCGGTT TGCTTTCAGT TCAAGCACCA
GAAATGGCGG ATAGAATCAT AGAGAATTTT GCCGAACATA AGGCCTTGTA A
|
|---|
| Protein sequence | MGQEKLVAEV GSTTTVVSMY NEKGKLVAQG QSSTTVEAGD VLLGLNRAQE DLKQQLDQNG
SFSGSLDDLE MYATSSAAGG LKMTVHGLVY DMTARASREA ALGAGAVIHQ VTAGELSQED
IDNTLEISPN IILLAGGVDY GEEKTVVNNA RYIADSGIKA PIVYAGNVAC QEKVVKILES
AGLYVKAVEN VYPTVDELNV EPARKAIQQI FQSHIVHAPG MEKIKERVNG SIMPTPGAVM
EGAKRVADKI GDAMVIDVGG ATTDVHSVTD GSQEMLDLTV APEPRAKRTV EGDLGVYRNA
KNLIDLMDES YFESGMSQED MLNIIADWEP FPQNESEKHL LQLFAKIATF TAVDRHAGAI
KYLYGPTGRQ KIVKGKDLTK IRYVIGTGGA LGRSKPGEKV IKELLKRYQP SKLTPPKDAQ
LILDSNYSLA AIGLLSVQAP EMADRIIENF AEHKAL
|
|---|
| |