Gene Nther_1146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1146 
Symbol 
ID6315372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1211093 
End bp1212124 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content40% 
IMG OID642643518 
Producturea amidolyase related protein 
Protein accessionYP_001917317 
Protein GI188585772 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1984] Allophanate hydrolase subunit 2 
TIGRFAM ID[TIGR00724] biotin-dependent carboxylase uncharacterized domain 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.234826 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.390267 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACAA TTAAAATAAC AGACCCGGGG CCATTTACCA CAATACAGGA TTTAGGTAGA 
TTTGGGTTTC AAAGGTATGG CATGGCCCCA TCGGGAGCCA TGGATGAAGT TTCCTTTCAA
TTAGGAAATT ATCTTCTAGG AAATGAGCCC AATGCCGCAG CAATAGAATT CACTTTAAAA
GGTCCCGAAT TAGAAATAAA AAAAGAGACA TTGGTGGCTG TTACCGGGGG GCGTTGCCAA
GTAAAAGTGA ATGGTGAACT AAGTCCCATG TATGCTCCAT TACATCTGTG TCCAGGGGAT
CAAATCAGTT TTTCTGGGAT CCAAGAGGGT TTAAGAGGAT ACCTGTGTGT TTTAGGTGGA
GTTGATGTGC CTTTAGTCAT GCAAAGTCGT TCCACTTACC TCAAAGGCCA AATTGGAGGG
ATAGAAGGAA GGCAGGTAAA AAAAGGGGAC ACCTTAGATG CCTGTTCCTA TTCTTCACTG
GACTTTTCAC ATATAGATCA AAGGTCTCCC TTGCCAACTA AGTATTGGCC TACATTCATA
TCACCTTATG AAATAGATGT TATTTTGGGT CCACAAGTTG ATTATTTTTC TGAACAAGGA
GTCAATACCT TTCTTTCACA AGAATATCAG ATAAGCGATG CTGCAGATAG AATGGGTTAT
CGCTTGAATG GTCCGGAAAT TGAACATCAG GGAGCAGCAG ATATAATTTC AGATGGTATT
CCCTTAGGAG GGATCCAAGT CCCCGGGCAC GGACAGCCAA TTATCATGAT GAAAGATCGG
CAAACAACAG GAGGTTATCC CAAAATTGCT ACGGTAGCTT CTTATGAGAT ATATAAGCTA
GGACAGGCTA AACCTGGAGA CCGAATTAAA TTTAATAAAA TTTCGTTGGA AGAAGCAAGA
CAAAAGAAAC ATAAACATGA TCTTTGGTTT GATAATTTGG TAGATTTAAT TAAACAGCCT
GTAAAAAATA AGCAGATCAT AAATCTTCAT TTTAAAAGTT CATCTTACAA GGTGACAATT
CAGGAGTTAT AA
 
Protein sequence
MSTIKITDPG PFTTIQDLGR FGFQRYGMAP SGAMDEVSFQ LGNYLLGNEP NAAAIEFTLK 
GPELEIKKET LVAVTGGRCQ VKVNGELSPM YAPLHLCPGD QISFSGIQEG LRGYLCVLGG
VDVPLVMQSR STYLKGQIGG IEGRQVKKGD TLDACSYSSL DFSHIDQRSP LPTKYWPTFI
SPYEIDVILG PQVDYFSEQG VNTFLSQEYQ ISDAADRMGY RLNGPEIEHQ GAADIISDGI
PLGGIQVPGH GQPIIMMKDR QTTGGYPKIA TVASYEIYKL GQAKPGDRIK FNKISLEEAR
QKKHKHDLWF DNLVDLIKQP VKNKQIINLH FKSSSYKVTI QEL