Gene Nther_1139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1139 
Symbol 
ID6315365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1205244 
End bp1206041 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content31% 
IMG OID642643511 
Producthypothetical protein 
Protein accessionYP_001917310 
Protein GI188585765 
COG category[R] General function prediction only 
COG ID[COG0390] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID[TIGR00245] conserved hypothetical protein TIGR00245 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.529413 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGCTG GAGTAGTTGA ATTAGGTTTT TATCAGATGT TATCAGCTTA TATTTTTGTA 
ATAATTCTGT TATTAATTGT CAAAGTCAAG CAAATCCCTA GAGAAAAAGA AATCATCTTA
TCTACTATCA GAATGACAAT CCAATTAATG CTTATGGGCT ATGTATTAAT TTTTATTTTT
GATAATCAAC ATCCGTTACT GACACTATTT GTGATTTTAG TTATGGAAAC CTTTGCTGTT
ATAAACATCT TTAGCAGAGC TAAGAAAAAA TTGAGCTTAT ACTTTAAGAA AATTATAGCT
TTTTCAATGG TTTTTGGCAC TTTAATCACC TTATTCTATT TTATCTTTAT AGTTATCAAT
GTCACCCCTT GGTATGATCC AAGATACTTT GTTACTATTG CTGGCATGTT AATTGGTAAT
TCTATGACTG GTATTACCCT TGGCGTAGAA CGTATGTCTG ACGGAATGGA AACAGAAAAA
GAAACTGTCG AAGGGTATCT AATGCTAGGT GCAAGACCAA ATGTTGCAGC AAAAAGAATC
ATTAATAATT CTTTTGAATC TGCAATTATA CCGACTATTA ATAATATGAT GGGTATGGGA
ATTATCTTTT TACCAGGTAT GATGACCGGT CAAATTTTAT CCGGAATTTC ACCTTTGACA
GCAATTTCAT ATCAAATTGC AATTATGTTA GGTATACTAG GAGGAGTTTC TCTAACAGTA
ATTACCTTTG TCCAACTGGG TTACAAAACC TTTTTCAACG AAAAAAATCA ATTAATAAAC
GACACTGGTG ATTATTAA
 
Protein sequence
MEAGVVELGF YQMLSAYIFV IILLLIVKVK QIPREKEIIL STIRMTIQLM LMGYVLIFIF 
DNQHPLLTLF VILVMETFAV INIFSRAKKK LSLYFKKIIA FSMVFGTLIT LFYFIFIVIN
VTPWYDPRYF VTIAGMLIGN SMTGITLGVE RMSDGMETEK ETVEGYLMLG ARPNVAAKRI
INNSFESAII PTINNMMGMG IIFLPGMMTG QILSGISPLT AISYQIAIML GILGGVSLTV
ITFVQLGYKT FFNEKNQLIN DTGDY