Gene Nther_1122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1122 
Symbol 
ID6315351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1189730 
End bp1190563 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content32% 
IMG OID642643494 
Productcytochrome c assembly protein 
Protein accessionYP_001917293 
Protein GI188585748 
COG category[R] General function prediction only 
COG ID[COG4137] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.719311 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCGA TTTCCATAAT TAATCTTATA ATAGCTATCA GTTTGCTTGC ATCGACAGCC 
TTATTTATTC TTTCAGTAAA ATATTTAGAT CAGCCTGGAA ATAACTATCA AAAAGCTATT
TCTCAATTTC TGGGTGATTT TGGCTATCTA TTGCTGTTGT CTAAATTTAT AGGTAGGAGC
TATGCTTTAG GGTATTTGTC ATTATTTTCA TTTTATGAGA CGCTGATTTT AGCTGCAATT
GTCTTGGTAA CCGTGGCCAA AGCTGCAGAA AAAATATATG ATGTTGAGCT ATTAAAATTT
TTCAGTTATC CTTTGTCAGC TTTATTTATG ATAGTCTCTT TATTTGCTCC CCAAAATCCT
CCGCAACTTA CTTCCGAAAT GATGGGAGGA TGGCTTGGCT ATCATATAGC CTTTGTGATT
ATTGCATATG GTTGTTTTAG TGCGTCTTTT TTAACTGAAG GAATGTATTT GTTTCTGGAT
CGTTGTATAA AAAACAAACA AATTACTATT ATTGTCAAAT TGATTCCTTC TCTAGATCAG
CTGAACAAGT TAAATTATCG GATAATATTT ACCGGGTTCA TATTTTTAAC AGTAGGTATT
GGATTTGGCG GTATATGGAG TGATGAAATT TGGGGTGCTT ACTGGTTTTG GGAGCCCAAA
TTTATAGTTA CCCTTTTCAT TTGGTTGGTG TATGGAATAT ATCTGTATAA TAAATTAATA
TGGGGATTTC AAGGTAAGGT GATTTCTTAT TTGAATTTAA TTGGTTTTAT TGCAATTATG
ATAAATTATT TTGTGGTAAG ATTGCTGGAT GGTGGACTAC ATCACTTTTA TTAA
 
Protein sequence
MNPISIINLI IAISLLASTA LFILSVKYLD QPGNNYQKAI SQFLGDFGYL LLLSKFIGRS 
YALGYLSLFS FYETLILAAI VLVTVAKAAE KIYDVELLKF FSYPLSALFM IVSLFAPQNP
PQLTSEMMGG WLGYHIAFVI IAYGCFSASF LTEGMYLFLD RCIKNKQITI IVKLIPSLDQ
LNKLNYRIIF TGFIFLTVGI GFGGIWSDEI WGAYWFWEPK FIVTLFIWLV YGIYLYNKLI
WGFQGKVISY LNLIGFIAIM INYFVVRLLD GGLHHFY