Gene Nther_1103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1103 
Symbol 
ID6314986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1165743 
End bp1167005 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content37% 
IMG OID642643475 
ProductATP-dependent Clp protease ATP-binding subunit ClpX 
Protein accessionYP_001917274 
Protein GI188585729 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1219] ATP-dependent protease Clp, ATPase subunit 
TIGRFAM ID[TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.152502 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTAAAT TAAACGATGA AAAGGGACGC TTAAAGTGTT CCTTTTGCGG TAAGACCCAA 
GAACAAGTTA AAAAACTTGT AGCGGGTCCA GGTGTTTATA TTTGCGACGA GTGTATCGAA
CTATGCAATG AGATAATAGA AGAAGAACTT AATGATGATA GCGATATGGG CTTTTCTGAA
ATTCCTAAAC CTCAAGAAAT ATACGAAATT CTCAATGATT ATATCATTGG GCAGGAAGAA
GCTAAAAAAG CCCTATCAGT TGCTGTTTAT AACCACTATA AACGTGTAAA TAACGAAGCC
AAAAAGAAAG ACGATGTTGA GATTCAAAAA AGTAATATCT TATTACTTGG TCCAACTGGT
GTAGGTAAAA CTTTGTTGGC TCAAACCTTG GCAAAAATAT TAAATGTTCC CTTTGCCATG
GCTGATGCTA CTTCATTAAC CGAAGCTGGT TATGTAGGTG AAGACGTAGA AAATATCCTG
CTAAAATTAA TTCAATCAGC GGATTATGAT GTTGAAAAAG CTGAAAAAGG GATAGTTTAT
ATCGATGAAA TTGATAAGGT TGCAAGGAAG ACTGATAATC CATCTATTAC TCGAGATGTT
TCAGGAGAAG GGGTACAGCA GGCACTGCTT AGGATTTTAG AAGGAACAAA AGCAAGTGTA
CCTCCTCAAG GTGGTAGAAA GCATCCACAT CAAGAATTTA TCCAAATAGA TACCACCAAT
ATCTTGTTCA TTTGCGGTGG AGCTTTTGAT GGTATTGACA AGATTATTCA GAACAGGATT
GGAAAGAAAG GTCTAGGTTT TGGAGCCGAG GTACAAAGTG CTAAGGATGA AGGTATAGGT
GAAATCCTAT CAAAAGTTCT ACCTCAAGAC CTTCTGAAGT TCGGGTTGAT TCCAGAGTTT
GTAGGGAGAA TTCCTGTAAT CTCGTCTTTA GATGCCTTGG ATGAAGATGC CTTAGTACGA
ATCCTAGTTG AACCCAAAAA TGCTTTAGTT AAGCAGTATC AAAAGCTATT TGAGATAGAT
GGTGTAGAAC TGGAAATGCA AGAAGATGCA CTAAGAGCTA TAGCTCGAGA GGCCATTGAG
AGAAATACAG GAGCCAGAGG TTTAAGAGCT ATAGTTGAAG AACATCTGAA TGATATTATG
TACGATCTAC CATCTATGGA TGATGTCAAT AAATGTATCA TCACAGAAGA AGTGATTGAA
AAAGATGAAA GACCTATGTT AGTAAAGGAT AATCAAGGTG AGAAAAAGCA TGAGTCTGCA
TAG
 
Protein sequence
MFKLNDEKGR LKCSFCGKTQ EQVKKLVAGP GVYICDECIE LCNEIIEEEL NDDSDMGFSE 
IPKPQEIYEI LNDYIIGQEE AKKALSVAVY NHYKRVNNEA KKKDDVEIQK SNILLLGPTG
VGKTLLAQTL AKILNVPFAM ADATSLTEAG YVGEDVENIL LKLIQSADYD VEKAEKGIVY
IDEIDKVARK TDNPSITRDV SGEGVQQALL RILEGTKASV PPQGGRKHPH QEFIQIDTTN
ILFICGGAFD GIDKIIQNRI GKKGLGFGAE VQSAKDEGIG EILSKVLPQD LLKFGLIPEF
VGRIPVISSL DALDEDALVR ILVEPKNALV KQYQKLFEID GVELEMQEDA LRAIAREAIE
RNTGARGLRA IVEEHLNDIM YDLPSMDDVN KCIITEEVIE KDERPMLVKD NQGEKKHESA