Gene Nther_1089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1089 
Symbol 
ID6316614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1150095 
End bp1151387 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content39% 
IMG OID642643462 
Producturacil-xanthine permease 
Protein accessionYP_001917261 
Protein GI188585716 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2233] Xanthine/uracil permeases 
TIGRFAM ID[TIGR00801] uracil-xanthine permease 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000355646 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.00900914 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAACTA ACACAAACCA ATTACTAACC CAACTTCCCA TGGCTTTTCA ACACGTATTT 
GCCATGTTTG GGGCTACAGT TTTAGTCCCT TTCATTACTG GGCTGAACCC CTCTGTAGCT
TTGTTTACAG CCGGATTGGG AACTCTCATC TTTCACTTAG TAACGGGAGG AAAGGTTCCA
GTCTTTTTAG GTTCGTCATT TGCTTTTATC GCAGGTATCC AAGCAGTAAA CGCTAATTTT
GGACTAGCCC ATGCCACTGG GTCTCTGATA GCAGTTGGTG TTGTTTATCT GTTAATAGCG
GGAGCTGTAG TATTAATTGG AATAAATAAT ATCAGGCGTC TTTTTCCTCC AATAGTTACT
GGCCCAATTA TCATAGTAAT AGGTCTTATC CTAGCACCTA ATGCCATAGA AATGGCTGCA
GAACATTGGG GTATCGCACT CATTACAATA GTGGCAGTAT TAACTACAGG GATTATGGGA
AAAGGATTTT TAAAGATAAT CCCCATCTTA ATTGGAATCA CCACAGGTTA CGTAGCTAGT
GTTTTGTTCG GAATAATTGA TTTTGATCCT ATCCGAGATG CAGCTTGGTT GAGATTTCCT
GAATTCATGG CTCCTGAGTT TTCCATGGAT GCGTTAAAAA TTATGATCCC TATTGCATTG
GTAACCGTTA TTGAGCATAT TGGGGACATT ACCACCAACG GTGCTGTAGT AGGTAAAGAC
TTTTTTAAAA ATCCTGGCCT ACACAAGACA TTAATCGGTG ACGGAATTGC TACAATCGTA
GGTGGTGCCT TAGGAGGACC TCCTAACACC ACATACGGTG AAAATACAGG AGTATTAGCC
CTAACAAAAA ACTATAACCC AGCCATCATA AGAATAGCGG CAGTACTAGC CATTGGTTTC
AGTTTTATTG GTAAACTTGG AGCATTCATC ATGACTATCC CAGAACCAGT AATGGGCGGA
GTTAGCTTCG TACTTTTCGG CATGATTGCC AGCGTTGGAG TTAGAACATT AGTTGATTCA
GGTCCTGATC TGTCTAATTT GAGAAACTCA AGTGTAGTAT TCATAATATT AATAGTAGGA
ATCTCATATT TACAAGGAGA AGAAAATCTT GCAACTATTC AATTGACAGA ATACGCTAGT
CTTGAAGGGT TAAGTTTAGC TGCCCTGCTA GGGATATCAT TAAATGCAGT TTTCGAATTT
ATTTTGCCCA AAATATCAGC AATTGAAAAT ATTATCCCTT CAAATGAAGG GTATAACTCC
ACTGAAAAAG TGGCTCCAAA TAAATCAAAA TAA
 
Protein sequence
MKTNTNQLLT QLPMAFQHVF AMFGATVLVP FITGLNPSVA LFTAGLGTLI FHLVTGGKVP 
VFLGSSFAFI AGIQAVNANF GLAHATGSLI AVGVVYLLIA GAVVLIGINN IRRLFPPIVT
GPIIIVIGLI LAPNAIEMAA EHWGIALITI VAVLTTGIMG KGFLKIIPIL IGITTGYVAS
VLFGIIDFDP IRDAAWLRFP EFMAPEFSMD ALKIMIPIAL VTVIEHIGDI TTNGAVVGKD
FFKNPGLHKT LIGDGIATIV GGALGGPPNT TYGENTGVLA LTKNYNPAII RIAAVLAIGF
SFIGKLGAFI MTIPEPVMGG VSFVLFGMIA SVGVRTLVDS GPDLSNLRNS SVVFIILIVG
ISYLQGEENL ATIQLTEYAS LEGLSLAALL GISLNAVFEF ILPKISAIEN IIPSNEGYNS
TEKVAPNKSK