| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1082 |
|---|
| Symbol | |
|---|
| ID | 6316521 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | + |
|---|
| Start bp | 1141795 |
|---|
| End bp | 1142742 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 642643455 |
|---|
| Product | electron transport complex, RnfABCDGE type, D subunit |
|---|
| Protein accession | YP_001917254 |
|---|
| Protein GI | 188585709 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD |
|---|
| TIGRFAM ID | [TIGR01946] electron transport complex, RnfABCDGE type, D subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.0800979 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAGA AACTTGTGGT GTCTTCTTCA CCTCATCTCA GGTCACCAGA AACTATAGAT
AGTATTATGA GAGATGTGTT AATAGCTTTA ATACCACCTT TTATTGTAAG CATCTGGTTA
TTTGGTTGGA CATCTATCAT TGTTGTTGCA GTGGCAACTG CAGTATCTAT GATAACTGAA
TCTCTTATAG TCCATAAATC ATTGGCTCCA AGGAAACTTA AAGGAGATTT AAGTGCTGCA
GTCACAGGGG TTATTTTTGG ACTGAGTTTG CCCCCTGGGA CGCCCTGGTG GGTAGTAGCT
TCAGGCGCTT TTGTTGCTAT TTTCATTGCA AAACAGATAT TTGGAGGGAT TGGATATAAT
ATTTTCAATC CCGCTTTAGT AGGTAGGGCT TTTGTAGTAG TAGCTTGGCC CTCTTATTTA
ACTCATTGGA CAGAACCCTT TGAACCTGTT GATGCTGCTT CTAGGGCCAC CCCATTGGCA
TTCCCGGGTA TGACAGAGGG TTCACCCTTT GAAATAGTTC CCTTTACTGA CTTGTTTGTA
GGAACCATTG CTGGTTCACT TGGTGAAACC TCGGCTTTAG CAATTACAAT TGGTGGAATA
TTTCTACTAA TAAGAGGACA TATTGATTTC AGAGTGCCTC TCGGTTTTTT GGGTGCCTTG
GCTTTAGTTG TTTCTATTGC AGGCGAAAAT GCATTGTTCC ATTTAGTTAG CGGTAGTGCT
TTTTTTGGAG CTATTTTTAT AGCCACTTGC ATGGTCACCT CTCCTTATAC AAAAACTGGA
AAACTAATTT TTGGGATAGG TTGTGGTGCC ATAACTGCCA TTTTAAGGAT GTACGCAGCA
ATTCCCGCTG GAGTAACCTA TGCGGTGCTA TTGATGAATG CATTAGTACC CTTTATTAAT
GTTTATACTA AACCTAGAGT CTATGGGGAG GTTAATAATA AAAAATGA
|
|---|
| Protein sequence | MKEKLVVSSS PHLRSPETID SIMRDVLIAL IPPFIVSIWL FGWTSIIVVA VATAVSMITE
SLIVHKSLAP RKLKGDLSAA VTGVIFGLSL PPGTPWWVVA SGAFVAIFIA KQIFGGIGYN
IFNPALVGRA FVVVAWPSYL THWTEPFEPV DAASRATPLA FPGMTEGSPF EIVPFTDLFV
GTIAGSLGET SALAITIGGI FLLIRGHIDF RVPLGFLGAL ALVVSIAGEN ALFHLVSGSA
FFGAIFIATC MVTSPYTKTG KLIFGIGCGA ITAILRMYAA IPAGVTYAVL LMNALVPFIN
VYTKPRVYGE VNNKK
|
|---|
| |