Gene Nther_1058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1058 
Symbol 
ID6314525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand+ 
Start bp1117440 
End bp1118042 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content33% 
IMG OID642643430 
Productpentapeptide repeat protein 
Protein accessionYP_001917230 
Protein GI188585685 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.819721 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.059733 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAACTTG ACCAGTCAAA ATATGAAAAT GAGGTATTTG ATGATCTTGA TCTGAGTTGC 
AGGGAGTTTA AAAATCTCAC TTTTACGAAT TGTAGTTTTG TTGATACTAA CTTGGAAGAA 
TTGAAAACTG ATGGATGTAT TTTTAATCAG TGTGACTTTA CAAACGCCAG GTTCAATGAG 
TCGAAACATC ATGAATCAGC ATTTTTGAAT TGTGACTTTG GGGGTACTAA TTTATTCTGT 
GTTTCTTTTT CTGATTGCAA AATGGTTGGG ACAGATTTTA CAGAAAGTAA AACAATAGCC 
ATGTATATAT TTGGAGGAGA CTGGTCTTAT ACTAATTTAA GACTCAGCAA TTTAAAAGGG 
TTAGATTTTA GTAGAACCAA ACTTTCTCAT GCCGATCTGT ATGGAGCTAA CTTAGAAAAT 
GCAGTTTTTA AAGAAGCAGA TTTAACAGGT GTAAATTTAG CAAAAGCCAA GCTTCAGGGC 
TGTGATCTTA GAGGAGCTAA AATTGAGGAT ATTGACTTTA GAAACCTGGA CTTAAAAAAT 
GTTAGACTAG ATTTAACTCA AGCAGCAATA ATCGTAGAGT CTTTTGGTGC TAAATTGGAA 
TAA
 
Protein sequence
MKLDQSKYEN EVFDDLDLSC REFKNLTFTN CSFVDTNLEE LKTDGCIFNQ CDFTNARFNE 
SKHHESAFLN CDFGGTNLFC VSFSDCKMVG TDFTESKTIA MYIFGGDWSY TNLRLSNLKG 
LDFSRTKLSH ADLYGANLEN AVFKEADLTG VNLAKAKLQG CDLRGAKIED IDFRNLDLKN 
VRLDLTQAAI IVESFGAKLE