| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1016 |
|---|
| Symbol | |
|---|
| ID | 6315142 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | + |
|---|
| Start bp | 1084328 |
|---|
| End bp | 1085224 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 642643388 |
|---|
| Product | Substrate-binding region of ABC-type glycine betaine transport system |
|---|
| Protein accession | YP_001917188 |
|---|
| Protein GI | 188585643 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000000028546 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTAAAA AGTTACTTGT TACACTAACT ATTCTTTTAC TAACAGCAAG TTTTGCGGTT
GGTTGTGATG GGGGTTCAGA AGAAGACGGA GATGCGTCAG TTCCTGAACG ATTTGATAAT
GAAATTGTAG GTATAGACTC TGGTGCTGAG ATTATGGGCA CAGTAGAAAA TGAAGTCATG
GTGGAATACG GCCTGGATGA GTACGATCTT GTTGAATCTA GTGAAGCTGG TATGATTACT
GAAATTGATT CTAGGGTAGA TGACGAGGAA TGGGTAGTGG GGATCGGTTG GACACCTCAC
TGGAAAATCC CAGAATATGA TATGAAATTT TTAGAAGATC CTAAAGGTAT ATTTGGTGAA
GCGGAAAATA TCAAAGCATT AAGTAGAGCA GGTTTTACTG ATGACATGCC TGAAGTTAGT
CAAACTTTAC AAAATTTTTA TTTGACAGAA GATCAACTTG GTGAGTTGAT GGCATTAGTA
GAAGACACAG ATAGTAACGA GAGGGAAGTT GTTAAAGAGT GGGCTGAAGA CAATCAAGAT
GTAATTTCTG AATGGGTGCC AGAAGATCCC GATGGGGAAG GCGAGACAGT AGAGCTTTTA
TACAATAACT GGACTGATGC TATTGCTTCC ACTAATCTAA TAGCTTATGT CTTGGAAGAG
GAAATGAATT ATGAAGTAGA AATGGAAATG GTGGATGTGG CTTTTGTTTT TGAAGGCTTA
GCTAGTGGAG ACTACGATGC CATGGTTTGT GCCTGGTTAC CATTAACTCA AGCAAATTAT
TGGGAAGAAT ACGGAGATGA CTTGGAAGAC TTGGGTCCTA TCTTTGAAGG AGCAAAATTA
GGGTTGGTAG TTCCCGATTA TGTTGAAATA GACTCCATTG AAGAAATGGC TGAATAA
|
|---|
| Protein sequence | MCKKLLVTLT ILLLTASFAV GCDGGSEEDG DASVPERFDN EIVGIDSGAE IMGTVENEVM
VEYGLDEYDL VESSEAGMIT EIDSRVDDEE WVVGIGWTPH WKIPEYDMKF LEDPKGIFGE
AENIKALSRA GFTDDMPEVS QTLQNFYLTE DQLGELMALV EDTDSNEREV VKEWAEDNQD
VISEWVPEDP DGEGETVELL YNNWTDAIAS TNLIAYVLEE EMNYEVEMEM VDVAFVFEGL
ASGDYDAMVC AWLPLTQANY WEEYGDDLED LGPIFEGAKL GLVVPDYVEI DSIEEMAE
|
|---|
| |