Gene Nther_0958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0958 
Symbol 
ID6316667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1013509 
End bp1014780 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content40% 
IMG OID642643330 
Productcopper amine oxidase domain protein 
Protein accessionYP_001917130 
Protein GI188585585 
COG category[S] Function unknown 
COG ID[COG2340] Uncharacterized protein with SCP/PR1 domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.990668 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATTACA AAAAAGTCTT CTTGTCTGCT GCAGTAGCAT GCCTGATTGC TATTCCTAGC 
ACTACTTCAG GAGCAGAGAC AGCCAAAATT GAGGTAGATG GTGAACAAAT CCCAACAGAG
GTACCACCTA AGATAGAAGA TAGTAGAACA ATGGTCCCTA TCAGAGTTAT TAGTGAAAAT
TTAGGTGCTT ATGTGGACTG GGATGGTGAC ACTAAAAGTG TACTAATAGC CCGTGAAGGT
GGCACAATCT CTAACCCTCT AAACCAGTCT AGAGATGAAA TTAGTCTAAT AGTAAATGGT
GAAATCATCT CAACGGACGT TTCTCCAAAT ATCGTAAATT CAAGAACTCT AGTACCAATA
AGGGCTGCTA GTGAAGCTTT AGGCTCATAC ATACAGTGGG ATGGCGACAC AAATACCGTC
CGAGTTTTTA CAGACTTTAA CCAGGAAGAA GACAAAACAG AAGATGATAC AGAAGATGAT
AAAAAAGAAG ATGATACTCA AGAAGACTTA GAAAGCCCAG AACAAGATAA GGGAGAAGAT
AGTGGACAAG ATAGAGACAC AGATACTGAA GACGAAAACG ATAGAAATGA TTATGATGAA
AAAGACCGTG AGAACGAAAA AGACAATAAA GAGGACAATG AGAAAGACGA TCCAGAACAA
GATGTCCCTG AAGACGATGA ACAAATAGCT GATAATTGGA CCCTTGAAGA TTACAATAAT
TATAACACCT CAAACTTTAG GGAAAATGAA CTTTTCCACC AAAGTGTAGA CTTCGATAAT
TTGGATTATC CCAGACTAAA TGCAGCTATT TTCTACGTTA CCAATGAAAT CCGTGCCGAA
CATAATTTGA GTGAATTAAA ACATACCGTC GAACTAGAGA TTGCTGCCTG GAACCATTCA
AAAAGCATGG CGGAACAGGA GTTTTTTAGC CATAACAACA GTTATAACAG TGACCGATAT
AGTCCTTCCG ACCGGGGAGA GCTGGCAGGA ATACTTAATC CCAGTATAGC CGAAAACATT
GCCATGAGTA GTTTTTATGA CGAAACTTAC CTGTCAATGG CGGAAAATAT TTTAGACATG
TGGATGGATT CCGAAGGACA TCGTGACAAT ATTCTATCTG AAAATGCCAT TCAATTGGGC
ACTGGTGCTT ACGATAGAGG AGGACAAGCT GGTCAATACG GAGGTGCAAC TTTATATTTC
ACCCAAAAAT TCCAGTGGTA CCAAGAAGTT GAATCAACCG ATAGCACAGA CCCTAGCCCC
CATCAGTATT AA
 
Protein sequence
MNYKKVFLSA AVACLIAIPS TTSGAETAKI EVDGEQIPTE VPPKIEDSRT MVPIRVISEN 
LGAYVDWDGD TKSVLIAREG GTISNPLNQS RDEISLIVNG EIISTDVSPN IVNSRTLVPI
RAASEALGSY IQWDGDTNTV RVFTDFNQEE DKTEDDTEDD KKEDDTQEDL ESPEQDKGED
SGQDRDTDTE DENDRNDYDE KDRENEKDNK EDNEKDDPEQ DVPEDDEQIA DNWTLEDYNN
YNTSNFRENE LFHQSVDFDN LDYPRLNAAI FYVTNEIRAE HNLSELKHTV ELEIAAWNHS
KSMAEQEFFS HNNSYNSDRY SPSDRGELAG ILNPSIAENI AMSSFYDETY LSMAENILDM
WMDSEGHRDN ILSENAIQLG TGAYDRGGQA GQYGGATLYF TQKFQWYQEV ESTDSTDPSP
HQY