Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_0956 |
Symbol | |
ID | 6316665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 1011956 |
End bp | 1012627 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642643328 |
Product | cyclase family protein |
Protein accession | YP_001917128 |
Protein GI | 188585583 |
COG category | [R] General function prediction only |
COG ID | [COG1878] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.161877 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATGTTA AGGGATTTAT TGATGTCACC ATGACAGCTT ATCATGGATT AAAAGGGTTC CCGACCCCCT GGATTTTAGA TTATCAGATG GAAGCTACTG CAACTCATGA AACTCATAAT CGATCTGTCA CTAAGTTATC GACCTCAACT CATACAGGGA CCCATATAGA TGTACCAGCA CATTTTTTGA GAAATGGAGC CACTTTAGAT AAGTTCTCTA TAGAAGATTT TTTAGGAACT GGTTATTTAC TGGACTTTTC TTATAAAAAC AGCTTAGATG GTATAGATAT ACAAGATATT AAAGAAACAG GTTATCAAAT AGGTGCAGGA GATATTGTGA TTTTTAGAAC TGATTGGTCT GATCACTTTC CGTCAAAAAA GTATTTTAGC CAAGCTCCTT TTATTACACA AGCAGCTGCA GATTTTTTAT GTGAACGAAA TGTGAAAGCA ATAGGTGTAG ATACTGCCAG TGTAGAAGAT CCCAGAGAAT TGAGCCCTCA AAAGGCTTCA GCCATTCATC AGAAATTGCT AGGATCAGGA ATGTATATTA TCGAAGGTTT GACAGAATTA AAACAAATTC CTGAAGGACA AATTGAGATT ATTTGCTTTC CTTTAAAACT TAAATCAGCA GATGGAGCTC CTGCCAGAGT CGCATTAAAA CCTGTTAAAT AA
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Protein sequence | MNVKGFIDVT MTAYHGLKGF PTPWILDYQM EATATHETHN RSVTKLSTST HTGTHIDVPA HFLRNGATLD KFSIEDFLGT GYLLDFSYKN SLDGIDIQDI KETGYQIGAG DIVIFRTDWS DHFPSKKYFS QAPFITQAAA DFLCERNVKA IGVDTASVED PRELSPQKAS AIHQKLLGSG MYIIEGLTEL KQIPEGQIEI ICFPLKLKSA DGAPARVALK PVK
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