Gene Nther_0868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0868 
Symbol 
ID6314549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp914676 
End bp917006 
Gene Length2331 bp 
Protein Length776 aa 
Translation table11 
GC content39% 
IMG OID642643241 
Productpullulanase, extracellular 
Protein accessionYP_001917041 
Protein GI188585496 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases 
TIGRFAM ID[TIGR02102] pullulanase, extracellular, Gram-positive 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAA TTCGTTATGG TCTACTTAAA GAAAGAACTA GGATAGAACT TGGTTTTGCT 
ACCATCCATG GCCTGACAGT GGAAGAATTA GAGGAACATT TGTCAATTAC AGACCGCAAT
CAAGAGAGAA TTTATTTTGA TAAAGTTTTG ATTGAAGATG CTGAGGAGAG TGTTTCTGTC
TACGGGGAGT TTGATGTCCA TAAAGCACCT TACCAAGTAA CGTTTCATGA AATGTCAGCT
ACGGTAATTG TAAGTTGGCA ACTCAAAGAT GAACTTTACG CTTATAATGG ATCTTTAGGC
CCGGAACTTC ATCAAGATGG ATCAGCTACA TTGAAACTTT GGTCTCCTAG TGCAGATAAT
GTTTCCGTTA TTTTATACGA TCGCTATGAC CAATATAAGA TCGTAGCAAA TAGTATTGAT
ATGACTCGCG GTCAGCGCGG TGTATGGGAA GTGACATTAG ATCAAAGGAA TACGGGAATT
CATGACTTAA CCGGTTATTA TTATCACTAT AAAATAAAAC GTTGTGATGA AGTCGTGACT
GCCCTAGACC CTTACGCCCC TTCTATGGCA GCTTGGGATA GCAATCAAGA AAATAAACTT
AGAATTGGCA AAGCTGCCAT TGTGGATCCA TCTTCAATAG GGCCAGAGTT AGATTTTGCC
CGTATCGAAG GGTTCAAAAA ACGGGAAGAT GCAATTATCT ACGAAATCCA CGTCCGTGAT
TTTACTTCTG ATCCATCCCT TGACAGTGAA TTGGAATCTC AGTTCGGGAC TTTTTCTGCC
TTTATTGAAA AACTTGATTA TATTAAAAAT TTGGGTGTTA CACATATTCA ATTACTCCCG
GTGATGAACT ATTACATTGT GGATGAACTT AATAATGATC AGCGCTTCAT GGAGTACTCC
TCAGCCCACA ATAACTATAA TTGGGGTTAT GATCCCCATA ACTATTTTTC TTTAACAGGT
ATGTATTCAG AAAACCCCGA AGACCCAAAG CAGCGGATTA GAGAATTTAA AAATCTGGTA
AATGAAATTC ACCGCCGTGG CATGGGTGTG ATCTTGGATG CAGTTTATAA TCACACAGCA
AGGGTTCATA TTTTCGAAGA TTTAGAGCCT AATTATTATC ATTTTATGGA AGCTGACGGG
ACACCTCGTA CTAGTTTTGG AGGCGGTCGT CTGGGTACAA CACATAAAAT GGCTCGGCGC
ATTGTTGTGG ATTCAATTTT GTACTGGGTT AAAGAGTTCA AAGTAGATGG ATTTCGATTT
GACATGATGG GTGACCATGA CGCAGAAACT ATCCAGATGG CTTACGATAA AGCTAAAGAG
ATTAACCCTG AAATTGTCAT GATCGGTGAA GGTTGGTTGA CTTTTGCCGG AGATCAATTA
GATCCTGAAG TACCGGCGGC AGATCAACAC TGGATGCAAT TTACAAATAG TGTTGGTTGT
TTTTCCGATG AGTTTCGTAA TGAATTAAAA TCAGGTTTTG GAATGGAAGG TGAGCCTCGC
TTTATCACTG GAGGCGGTCG TCATATTGGG AAAATTTTTG ATAATTTAAG GGCGAACCCT
CATAATTTTA AGGCAACTAA CCCTGGAGAT GTAGTTCCCT ATATTGCGGC TCATGACAAT
TTAACCCTGC ACGATGTAAT TGCATTTTCC ATCCAAAAAG ATCCCGAATA CCATCAAGAA
GAAATTCAAA AACGTATTCG ACTGGGAAAT CTCATGACTC TGACTGCCCA GGGAACATCT
TTTCTCCATG CAGGCCAAGA ATTTGGGCGT ACAAAACAAT TTCGTCATCG AGATTATCAA
GGATGGGTGG ATGACCTACC AGCTAATTCC ACATTTATGA CCAATAAAGA CGGTGAACCC
TTTAATTTCC CTTATTTTAT TCACAATTCT TATGATTCTT CTGATGCTGT AAATAAGTTT
GATTGGCAGA AAGCTACTAA TATAGAAGAG TACCCGATGA ATGTCATGAC GCGAGAATTT
ACACGAGGTT TGATAAAACT TCGCAGGTCA ACAGATGCTT TCAGACATGG AACAATTTCA
GAAATTGATG AACATGTGAA AATGATCCAT GCTCCAGAGA TTCATGATCA CGACCTTTTA
ATTGGGTATA GAACCGAGTC TTCAGACGAA ACTGAAGAAT ACCTGGTTTT TGTCAATGCA
GACGAACGTG AACGTGAATT GACTGTAACT GATTATGATT TAGCCCGGGG GGAAGTGATA
GTGGATAGTA ATGAAGCAGG TACTGAAGAG GTCAAGGAGC CATCAGGATT TGAATTGACT
TCTGATGGCA TAAGAATTGA TCCTTTATCT GCAGTAATTA TTAGATTGTA A
 
Protein sequence
MNEIRYGLLK ERTRIELGFA TIHGLTVEEL EEHLSITDRN QERIYFDKVL IEDAEESVSV 
YGEFDVHKAP YQVTFHEMSA TVIVSWQLKD ELYAYNGSLG PELHQDGSAT LKLWSPSADN
VSVILYDRYD QYKIVANSID MTRGQRGVWE VTLDQRNTGI HDLTGYYYHY KIKRCDEVVT
ALDPYAPSMA AWDSNQENKL RIGKAAIVDP SSIGPELDFA RIEGFKKRED AIIYEIHVRD
FTSDPSLDSE LESQFGTFSA FIEKLDYIKN LGVTHIQLLP VMNYYIVDEL NNDQRFMEYS
SAHNNYNWGY DPHNYFSLTG MYSENPEDPK QRIREFKNLV NEIHRRGMGV ILDAVYNHTA
RVHIFEDLEP NYYHFMEADG TPRTSFGGGR LGTTHKMARR IVVDSILYWV KEFKVDGFRF
DMMGDHDAET IQMAYDKAKE INPEIVMIGE GWLTFAGDQL DPEVPAADQH WMQFTNSVGC
FSDEFRNELK SGFGMEGEPR FITGGGRHIG KIFDNLRANP HNFKATNPGD VVPYIAAHDN
LTLHDVIAFS IQKDPEYHQE EIQKRIRLGN LMTLTAQGTS FLHAGQEFGR TKQFRHRDYQ
GWVDDLPANS TFMTNKDGEP FNFPYFIHNS YDSSDAVNKF DWQKATNIEE YPMNVMTREF
TRGLIKLRRS TDAFRHGTIS EIDEHVKMIH APEIHDHDLL IGYRTESSDE TEEYLVFVNA
DERERELTVT DYDLARGEVI VDSNEAGTEE VKEPSGFELT SDGIRIDPLS AVIIRL