Gene Nther_0809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0809 
Symbol 
ID6315725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp843362 
End bp845809 
Gene Length2448 bp 
Protein Length815 aa 
Translation table11 
GC content33% 
IMG OID642643183 
ProductLexA repressor 
Protein accessionYP_001916983 
Protein GI188585438 
COG category[K] Transcription
[L] Replication, recombination and repair
[T] Signal transduction mechanisms 
COG ID[COG0210] Superfamily I DNA and RNA helicases
[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.642499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0000861607 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAACTAA ATGTTGATCA GAAGCGGATT ATTGAAACCA AACCTGGTGG ACACATGTTG 
ATAAGAGGAG TGGCAGGAAG CGGGAAAACA ACTGTAGCTG TACATAAAAT TCCTCATTTA
CTCAATCACT ATTGCTCTCA GGATGACAAG GTCCTGGTTA TTACCTTTAC TAAAACTTTA
ATAAACTACA TTAATTATAT ATACAACAAT ATAGAACATG AAACCACCTT ATTTTCTATG
ATAAATAGTG ATCAAAATTT ACAGATCTCA ACTGCAGATA AAATCATCTT TCACCTTTAT
CGAAAGTATG AAGAAAAAGC AGGGATAGAA GAGCGAGAGA TCATACCTCA AAAAGAAAAA
TATAGATTAT TAAACCAAGC TATTAAATAT ATTTCAAAGA AATATCCAGA TCAGACTGTT
GTTTCTGATA GGAATGTTAA TTTCTTAATT GATGAAATCG AGTGGATCAA AAGCAATAGA
TACACTGAGC TAGAAGTATA TCAAAATGTA GATAGATTAG GTAGAAGCAG GAATATGGAA
GAAGACGGTC CTCAAAGAAT ACTAAAAAAC TCCACTAACA GAGAAGCCAT ATTTAAGACT
ATGGTGCTTT ACGATGAATT GATGGACAAG GAAGGTTATA CTGATTTTAA AAACATGGCC
CTTCAGGTGT TGAAGGGAAT AGAAGAAGGT GTAATCACTT GCGATAAATT CACTCATATA
TTGGTAGATG AAAGTCAAGA TCTCAGCAGA GTCCAGTTAG AAATTATTAA AAATATGTTT
AAAAATGATA AGAATTACTC AAGTGTTATT TTCATAGCCG ATACAGCTCA GAGTATTTAC
CTCCAGTCCT GGCTGTCTCA TCAAAGTTTT AAAAGTATTG GCTTTGATAT GTCAGGTAGG
GCCAGAACTT TATCTAAGAA TTATAGGACA ACAGCTGAAA TAGCTGAAGC AGCCTATAGT
TTAATTGAAG ATGATCAAAC CATTGTTAAT AACGAAAATT ATGTAGAACC AGCAATTATT
GATCGAAGGG GAGAACACCC TGTTTATAAG CAATTTGACT CTGATGGAGA AGAGTTAGAT
TATGTCTGTG ATATGATTAA AAATAATTTA TATAAACACT ATGATCTCAA GGATATAGCC
ATAATAGCTA AAACCAGGAG ACAATTAGAA AATGCTAAAA GATATCTACT AAATAATAAA
GTTGATTGCA AGATTTTGAG TAAACGGGAA AATCATTTTT CCGATGATAA GGTTAAATTG
TTGACCATGC ATTCTATCAA AGGCCTGGAA TATAAAGTTG TGTTCATTAT TGGTATTAAT
GAAAATGTGA TTCCATATAG CCCTGATGGT AATATTGACC TGGAACAAGA GTCCATGGAA
CGAAGGTTAT TATATGTAGG AATGACCCGG GCCAAAGACA AGCTATTTTT AACCTCTAGT
GGAAACCCCT CCAAATTCAT TAATGATATC AATCCCAAGT ACCTTAAACT AAATAATGAA
AATGGGTTTT CCAGGTTTAA TCATATTGGT ATAGATAGTT ACAGGTTTAA GGAAAAAATA
GTGGATCTAT ACAGCCATGA AGAAGTGGTT AGACAATGGG TGATAGAAGA GCTAATCAAT
ACTTTAAATT ATCCCTTAGA ACTAATAGAC ATAGAATATG AAATTCAATT GTTTTCAGCC
ACGGGATATG TAGATATCGT TGTCTTTAAA AATATGAAAG GAAAAATTGT CCCCTATATA
TTCATAGAGG CTAAACATTA TAATACCAGC TTAGATAAAC AAGATGTCAA CCAGCTGAAA
TCGTACCTAG AAGGAAATAG TAGTGTAGAA TATGGTATGC TGACAAATGG TAAAGATTTC
AAGATACTAA AAAAGCAAAG TAAAAAGGGT GAATTTGAAT ATATTGATTC ATTACCGGAT
TATCAAGGGG ATATCAATAG TCTCTTTGAA GAATTTGAAT ATATAGACCT GAAGCGAGAT
AAAAAATACA AGCTCCATCG AAATCTAGAA GATAAATCAT TGATTCATGT ATATGATGAA
AAAATAGATA ATTCTCTAGA AGTTTCGGAG TATGTAAAAC TAAATGTCTA TGGAGAACTG
ACAGCTGGAG AGTTGAAATA TGCTCATCAA GATATCCAGG GGGATGTGGA ACTACCTAAA
GAGATTGTAC CTAATCCAGA TAACTGTTTC ATGTTAGAAG TGACGGGGGA TAGTATGATT
AATGCTGGTA TCGATAAAGG TGACTATGTA ATAGTCCAAA AACAAAATTA TGCCGAAAAC
CTGGATATAG TAGTTGCGGT GATAGATCAA GAAGCGACCT TGAAGAAGTA TAGCCGGATG
GGAGATACGA TCCTGCTAAT GCCTGAGAAT AAGAACTATG AACCAATTAT TGTTAGTGAG
GAAGATTTAA TAATTAATGG AAAGGTGATT GGGGTGTTGA AGACATAA
 
Protein sequence
MELNVDQKRI IETKPGGHML IRGVAGSGKT TVAVHKIPHL LNHYCSQDDK VLVITFTKTL 
INYINYIYNN IEHETTLFSM INSDQNLQIS TADKIIFHLY RKYEEKAGIE EREIIPQKEK
YRLLNQAIKY ISKKYPDQTV VSDRNVNFLI DEIEWIKSNR YTELEVYQNV DRLGRSRNME
EDGPQRILKN STNREAIFKT MVLYDELMDK EGYTDFKNMA LQVLKGIEEG VITCDKFTHI
LVDESQDLSR VQLEIIKNMF KNDKNYSSVI FIADTAQSIY LQSWLSHQSF KSIGFDMSGR
ARTLSKNYRT TAEIAEAAYS LIEDDQTIVN NENYVEPAII DRRGEHPVYK QFDSDGEELD
YVCDMIKNNL YKHYDLKDIA IIAKTRRQLE NAKRYLLNNK VDCKILSKRE NHFSDDKVKL
LTMHSIKGLE YKVVFIIGIN ENVIPYSPDG NIDLEQESME RRLLYVGMTR AKDKLFLTSS
GNPSKFINDI NPKYLKLNNE NGFSRFNHIG IDSYRFKEKI VDLYSHEEVV RQWVIEELIN
TLNYPLELID IEYEIQLFSA TGYVDIVVFK NMKGKIVPYI FIEAKHYNTS LDKQDVNQLK
SYLEGNSSVE YGMLTNGKDF KILKKQSKKG EFEYIDSLPD YQGDINSLFE EFEYIDLKRD
KKYKLHRNLE DKSLIHVYDE KIDNSLEVSE YVKLNVYGEL TAGELKYAHQ DIQGDVELPK
EIVPNPDNCF MLEVTGDSMI NAGIDKGDYV IVQKQNYAEN LDIVVAVIDQ EATLKKYSRM
GDTILLMPEN KNYEPIIVSE EDLIINGKVI GVLKT