Gene Nther_0704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0704 
Symbol 
ID6316418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp731308 
End bp734010 
Gene Length2703 bp 
Protein Length900 aa 
Translation table11 
GC content40% 
IMG OID642643084 
Productformate dehydrogenase, alpha subunit 
Protein accessionYP_001916884 
Protein GI188585339 
COG category[R] General function prediction only 
COG ID[COG3383] Uncharacterized anaerobic dehydrogenase 
TIGRFAM ID[TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATGACTG ACAGTCAAAA CCAAAACACA ATTACAATCA TGGCAGATGG TAATTCATAT 
CAAACAGAAC CAGGAGAAAG TATTCTCAAT GCCTTGGAAA GGCACGGATT TCACATTCCT
ACTCTTTGTT ACGAAGAGGG ACTGCCAATT ATTGGCGCCT GCAGGTTATG TGTGGTAGAA
ATTTCGGGTG CCAGAAAACT ACACCCAGCA TGTAGTACAC CGGTGGCAGA TGGTATGAAT
ATTTTTACTG AATCAGAACA GGTTGTTGAG GCCAGAAGAG AGATTTTAAA GCTACTGCTT
GCAAACCATG ATTTGAGATG TCTTACATGT GAGAGAAATG CCGATTGTAG GCTGCAGGAT
TACTGTTACC GCTATAAAGT GGAAGATACC CCTTATGTGG GAGATACTAA AAACTATCCT
ATAGATAGGT CAAACCCATT TTTCTTTCGA GATTACGGAA AATGTATCAT GTGCGGAAAA
TGTGTTAGTA TCTGCGCAGA AATAAATGGG GCCTATGTCT ACGATTTTAT GGATAGGGGC
TTTGATTCGA AGGTTACCAG TGCTTTTGAC GATGAATTAC AGAATACTAC TTGTACTTTT
TGTGGTATGT GTGTCAACGT TTGCCCCGTA GGAGCTTTGG TAGAGCGTTC TGTCGAGTGG
CGTTCTAGAC CCTGGGAGGT AGATAAAGTA CTGACTACCT GTCCTTACTG CGGAGTGGGC
TGTCAAATGT ATTTAAAAGT CCAGGACGGA GAAATAGTGG GTGTATCAAG AAAAAAAGAT
TCATTTACTA AAGGGCATCT ATGTGGAAAG GGTCAATTCG GTTGGGATTT CGTTCATTCA
AAAGATAGAT TGACTAAGCC CATGATTAGA AAAGATGGCC AGTTAACCGA GGTTAGTTGG
GATGTTGCCA TGGAGTACAT AAGTGAGAAT TTATCAAGAC TTTATAATGA AAGTGGCAGT
GATGCCATAG CAGGACTTAG TTCGGCCAAG GTGACTAATG AAGAAAATTA TCTGTTTCAA
AAATTATTGA GAACAGCTTT CAAGACTAAT CATATTGACC ACTGTGCCAG GCTATGTCAC
AGCTCCACTG TTTGGGGGCT TGCCACTAGC TTCGGAAGCG GTGCTATGAC TAATTCAATC
AATGAGCTTT TGGAGACAGA TTGTATTGTA GTGATAGGTT CAAATACTAC TGAAGCTCAT
CCCGTTACAG GTTACAGAAT AAAGCAGGCC AATAAAATGG GAAAAAATTT GATAGTGATT
GATCCCAGAA AAATAGAATT AACTAATTAT GCCGATGAAT GGCTTAAACT GAGACCCGCT
ACTAATGTAG CTCTACTGAA TGGTATTGCC AGAGTAATAT ATAAAGAAGG CTTATGGGAC
CAAGAATTTG TAGAAGCTAG AAGCGAAGGA TTTCAGGATT GGATAGAATC TATTGAAGGA
TATACACCTG AAAGAGTCCA AGAAATAACG GGTGTTCCAA AGGATAAACT GATTAGAACC
GCACGACTAA TAGGTAATAG CAATAAAGTG ACTTTTGTTT ATGCTATGGG AGTTACCCAG
TATACTCAGG GAACTCAGAA CGTTTTATCT ATAGCTAACT TGGCAATTTT AACAGGTAAT
GTAGGACGAA GAGGTACAGG TGTAAATCCC TTGAGGGGAC AAAACAATGT TCAGGGTGCC
TGTGATATGG GAGCTTTACC AAACTACTTC CCTTCATATC AACCTATCGA GGATCCAGTG
GCTCGGGATA AATTTAAAAA AGTTTGGGGT ACTGTTCCAG AACCCAAACC CGGGTTGACA
GTAACGGAAA TTATTGAAAA AGCAGGTACC GGTGATATTA GAGGACTATA TATTATGGGG
GAGAATCCGG CAGTTAGTGA TCCCGATGCT GATGAGGTTG AAAGATCATT AGAGGAAACA
GAATTATTGA TTGTTCAAGA TATTTTCATG ACTGAAACGG CAAAACTTGC CGATGTAGTT
CTACCTGCCA CTTCCTTTGC TGAAACGGAA GGTACTTTTA CCAATACTGA GAGAAGAGTA
CAGCGCGTTA GAAAGGCAGT TGAACCTCCG GGTCAAGCTA AAACAGACCG GGAAATTTTA
ACTCTGTTGG CTAATAGACT AGAACTTAAC TGGAATTACA ATAATGATGA AGAAGTGATG
GATGAAATTA ATAAATTGGC ACCCTTTTAT GGCGGGATCA CTTTTGCTAG GTTAGAAAAC
GAGGGCTTAC AGTGGCCTTG CTACCACACC TCACATCCTG GGACTGAATT TTTACACAAA
GATCAGTTTT CAAGGGGAAA AGGTAAATTT CATCCTGTAA AATACATTCC CCCTTCGGAG
GAGCCTTCAA AAAAGTATCC TTTAATCTTA AATACAGGGA GATGGCTTTA TCACTTCCAT
ACTGGCACCA TGTCTCTAAG ATCTCAGAGG CTTAAATGGC TTCGTGATGA AGAACTAGCT
ATGGTTAATC CCCAGGTTGC CAACGAATTG GATATAGAAG ACGGGGATAT AGTTAAGATT
GCTTCCAGGC GCGGTAAAGT GAAATCAAAA GTTCAGGTTA CAGATCATGT GCCCCAAGAT
ATGGTGTTTA TGACATTTCA TTTCCCAGAA ACCTTGACAA ATCGTTTAAC TACTAAGGCT
AAAGATCCTA TCTGTAAAAT TCCTGAACTA AAAAGTAGTG CAGTTAGAAT CGAGAAAGAA
TAG
 
Protein sequence
MMTDSQNQNT ITIMADGNSY QTEPGESILN ALERHGFHIP TLCYEEGLPI IGACRLCVVE 
ISGARKLHPA CSTPVADGMN IFTESEQVVE ARREILKLLL ANHDLRCLTC ERNADCRLQD
YCYRYKVEDT PYVGDTKNYP IDRSNPFFFR DYGKCIMCGK CVSICAEING AYVYDFMDRG
FDSKVTSAFD DELQNTTCTF CGMCVNVCPV GALVERSVEW RSRPWEVDKV LTTCPYCGVG
CQMYLKVQDG EIVGVSRKKD SFTKGHLCGK GQFGWDFVHS KDRLTKPMIR KDGQLTEVSW
DVAMEYISEN LSRLYNESGS DAIAGLSSAK VTNEENYLFQ KLLRTAFKTN HIDHCARLCH
SSTVWGLATS FGSGAMTNSI NELLETDCIV VIGSNTTEAH PVTGYRIKQA NKMGKNLIVI
DPRKIELTNY ADEWLKLRPA TNVALLNGIA RVIYKEGLWD QEFVEARSEG FQDWIESIEG
YTPERVQEIT GVPKDKLIRT ARLIGNSNKV TFVYAMGVTQ YTQGTQNVLS IANLAILTGN
VGRRGTGVNP LRGQNNVQGA CDMGALPNYF PSYQPIEDPV ARDKFKKVWG TVPEPKPGLT
VTEIIEKAGT GDIRGLYIMG ENPAVSDPDA DEVERSLEET ELLIVQDIFM TETAKLADVV
LPATSFAETE GTFTNTERRV QRVRKAVEPP GQAKTDREIL TLLANRLELN WNYNNDEEVM
DEINKLAPFY GGITFARLEN EGLQWPCYHT SHPGTEFLHK DQFSRGKGKF HPVKYIPPSE
EPSKKYPLIL NTGRWLYHFH TGTMSLRSQR LKWLRDEELA MVNPQVANEL DIEDGDIVKI
ASRRGKVKSK VQVTDHVPQD MVFMTFHFPE TLTNRLTTKA KDPICKIPEL KSSAVRIEKE