Gene Nther_0600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0600 
Symbol 
ID6316727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp624022 
End bp625776 
Gene Length1755 bp 
Protein Length584 aa 
Translation table11 
GC content38% 
IMG OID642642983 
Productcholine/carnitine/betaine transporter 
Protein accessionYP_001916783 
Protein GI188585238 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1292] Choline-glycine betaine transporter 
TIGRFAM ID[TIGR00842] choline/carnitine/betaine transport 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value8.57259e-11 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAA TTGAGGTTAG TAAAAAAGAA CTCGAAAAAA AGTTATTCGA CAGAAACTAC 
ACAAAGTACG GTCTTGACTT AAATCCAGTT GTTTCCTTTG GAAGTGGAAT TTTTATTATC
TTGTTTTCAC TGTATGCTCT GTTGGATCTC GATAGAGCCA ATCAAGTTTT TCAATTTGTT
AACGAAACAA TTGTAACTCG ATTTGATTGG GTATTTATTA TGTCAAGTAA TTTTTTTATC
TTAGTTTGTC TATATCTGGC CTTTTCCAAG CTTGGTAATG TTAAAATAGG TGGCCTTAAC
AGTGAACCGG AATTTTCTAA TTTTGCTTGG TATTCAATGC TTATTTCAGC AGGTATGGGA
ATAGGATTGA TGTTTTGGGC TGTAGGTGAA CCTCTCCATC ATTTCATGGA AGCCCCGCCA
ATCTTCACAA GTACCAGTGC TGATAAAGCA GCCCTTGCTA CTACTTTCTT TCATTGGGGA
TTGCATCCCT GGGGGGTCTA TGCCTTATTA GCTTTAGCTC TAGCTTTTTT TGCATATAAT
AGGAAGCTGC CTTTATCACT TAGGTCGGTA TTCTATCCTC TATTTAAAGA AAAAGTGTAC
GGTACCCTGG GAGATGTAAT TGACACCTTT GCCGTGTTAT CGACATTGTT TGGACTAGCT
ACTTCTTTGG GACTAGGAAT CAAGCAAATC AATAGTGGTC TCGATTACTT ATTCGGAATA
GGTTTTAATG TACAAATGCA GGTAACTTTA ATAGCCATTA TCACTTTATT GGCTACTATA
TCTGTAATTT CAGGGATTCA CAAAGGTGTC AGGTTTTTGT CAGAACTTAA CATAAGACTA
GCCTTTATAT TTATGATTGC AATATTTTTA TTAGGACCGA CTACTTATAT TCTGCGTTTA
TTTTCAAACT CTGTAGGCCT ATATTTCAGT AATATTGTAG AATATGCTTC CTTTATTAAC
ATTGATGGGG GAAGCTGGCA GGGAGATTGG TCTATATTTT ATTTGGCCTG GTGGATTTCC
TGGTCCCCCT TTGTTGGAAT GTTCATTGCT AGAATTTCTC GCGGAAGAAC TATCAGAGAA
TTTATCTTAG GTGTTTTGAT TGTTCCTTCC CTGCTGTCTT TCTTCTGGTT GTCTGTTTTT
GGGGGTACTT CCATTTTTTT AGATGGACAA GCAGGTGGAG CTTTATTTGA GACAGTACAA
GACGATTATC CTGTGGCTTT ATTTGAAATG ATCGATTTAC TACCAATGCC ATTTTTGGCT
GGAGCACTGC GGGTATTAAT GTTTATTTTA GTGATAGCGC TAGTATCATC TTATTTTGTC
ACATCTTCTG ATTCGGGCTC ATTGGTAGTA GACAAAATTA CATCTAGCGG CAAAATCAAC
ACACCTAAAA AACAAAGAGT TTTTTGGGCC TGTCTGGAGG GACTAGTTGC TGCTACACTG
TTACTGATCG GTGGTGAAAA GGCGCTGGAT ACTCTACAGA CGGCCGTTAT CAGTGCTGGA
CTACCCTTGG CTTTTATTTT GACAGTTATG GCCATTTCAT TAATTAAAGG AATCACCGTT
ACCCATAAAA AGCAGAAAAA GATCAGGGAT AAAAGAAAAT TTGAAGAACT CTTTGAAGAT
CTTGAAGAAG AACGGGAACA GGATCAGGAG CAAGGGGAAG GACAGCATAC GAGTGAAACT
GAAACAGCAG TTAAAAAAAC AGATCATCAA GCTGAACCAG AAGTATCACC TAATGTTACA
CCACCACAAG ATTAA
 
Protein sequence
MEKIEVSKKE LEKKLFDRNY TKYGLDLNPV VSFGSGIFII LFSLYALLDL DRANQVFQFV 
NETIVTRFDW VFIMSSNFFI LVCLYLAFSK LGNVKIGGLN SEPEFSNFAW YSMLISAGMG
IGLMFWAVGE PLHHFMEAPP IFTSTSADKA ALATTFFHWG LHPWGVYALL ALALAFFAYN
RKLPLSLRSV FYPLFKEKVY GTLGDVIDTF AVLSTLFGLA TSLGLGIKQI NSGLDYLFGI
GFNVQMQVTL IAIITLLATI SVISGIHKGV RFLSELNIRL AFIFMIAIFL LGPTTYILRL
FSNSVGLYFS NIVEYASFIN IDGGSWQGDW SIFYLAWWIS WSPFVGMFIA RISRGRTIRE
FILGVLIVPS LLSFFWLSVF GGTSIFLDGQ AGGALFETVQ DDYPVALFEM IDLLPMPFLA
GALRVLMFIL VIALVSSYFV TSSDSGSLVV DKITSSGKIN TPKKQRVFWA CLEGLVAATL
LLIGGEKALD TLQTAVISAG LPLAFILTVM AISLIKGITV THKKQKKIRD KRKFEELFED
LEEEREQDQE QGEGQHTSET ETAVKKTDHQ AEPEVSPNVT PPQD