Gene Nther_0568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0568 
Symbol 
ID6314710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp595244 
End bp595906 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content35% 
IMG OID642642951 
Productbeta-lactamase domain protein 
Protein accessionYP_001916751 
Protein GI188585206 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACTATTG AACAGTTTAA ATGTCCTCAC AGAGCTAAAA ATTTTAGTTA TGTAATTTCT 
TCTCCATCTA GCAACAAAAT CGCCATAGTA GATCCTTCAT TTTGTGATGA ATTATTGGCT
ACCAAGTTAA CAGAAGCTCA ATACGATGTA CAATATATTA TAAATACCCA TGCTCATTTT
GACCATACTT GGGGTAATGA TACCTTAAAA AACATATTTC CAAAAGCTAA ATTAATAGCT
CATACCAACA CAAAATATAA GCCTAACGCA AGTTCAGTTG ATATTGCAGT CGAGGACGGC
GAATCAATCT GGCTCGACCA ACTAGAAATA AAGATATTAC ATACCCCTGG TCACACTCCT
GAGGATATCT GCCTATTAGT CAATAATTCA CTCATTACGG GAGATACGCT CTTTGTGGGA
AAAGTAGGCG GCACAAGAGA TCGGGAAACA GCTAAAACAC AATTTGAAAG TTTAAAGAAA
TTAATGCAAC TTCCTCAAGA TACAAAAATT TATCCTGGTC ATAATTACGG CCCTAGTCCA
AGCTCAACTA TACAGGCAGA AAAGGAAGCT AACCCTTTTT GTCTGAGACT AGATAATTTC
GAAAACTTTT ATTGGCTCAA AGAAAACTGG AAAACATTTA AAGAAAAACA CAATTTAGAT
TAA
 
Protein sequence
MTIEQFKCPH RAKNFSYVIS SPSSNKIAIV DPSFCDELLA TKLTEAQYDV QYIINTHAHF 
DHTWGNDTLK NIFPKAKLIA HTNTKYKPNA SSVDIAVEDG ESIWLDQLEI KILHTPGHTP
EDICLLVNNS LITGDTLFVG KVGGTRDRET AKTQFESLKK LMQLPQDTKI YPGHNYGPSP
SSTIQAEKEA NPFCLRLDNF ENFYWLKENW KTFKEKHNLD