Gene Nther_0514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0514 
Symbol 
ID6315223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp537139 
End bp537864 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content36% 
IMG OID642642898 
ProductDNA repair protein RadC 
Protein accessionYP_001916698 
Protein GI188585153 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.120777 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.000000000242554 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGAAGTTG ACTATAATTT TAGAGGTGAG GGCGTGAAAA AAACACCATA TAGGACAATT 
AAATCTCTCC CAGAAGCTGA TCGTCCTAGG GAGAGATTTT TAAAACTGGG GCCCGAAGCT
ATTTCCGATT CTGAATTGAT TGCTATAATT TTAGGTACTG GCACTAAACA AAGCTCGGCT
TTAGACCTGG CAAATTCTAT TCTTTCAAAT TATGTGAGTA TTTTTAACCT TTTACAGGCA
ACTATCTCTG AATTATGTGA AATTCCAGGG ATTGGTTATG CAAAATCAAT TAAATTGAAA
GCAGCCTTTG AATTAGCTAA CAGATGTATG GCTAGAGAAC AATTGACCAT GGACAAAATT
ACAAGCCCCG AAGATATTTT TCGGCTGATG AATTTTAGGT TAAAAACCGA AACTAGAGAA
CACTTTCTGG CAGTAATGCT AAATACCAAA AGTTATCTAT TAAAAATAGA TTTGATATCT
ATAGGAAGCT TAAATGCAAC AATAGTTCAT CCACGTGAAG TCTTTAATAG GGCGATTAGA
GCTTCAGCTT GCGGCGTTAT ACTAGTTCAT AATCATCCTA GTGGTGATCC TGAACCAAGT
CAAGATGATA TCAAATTAAC AAATCGGTTG GTGGCAGCTG GTGATTTACT TGGAATACCT
ATCATGGATC ACGTTATTAT TGGTCATCAA AAGTTTTATA GTTTTTCCAG AGAAAATCAC
TTATGA
 
Protein sequence
MEVDYNFRGE GVKKTPYRTI KSLPEADRPR ERFLKLGPEA ISDSELIAII LGTGTKQSSA 
LDLANSILSN YVSIFNLLQA TISELCEIPG IGYAKSIKLK AAFELANRCM AREQLTMDKI
TSPEDIFRLM NFRLKTETRE HFLAVMLNTK SYLLKIDLIS IGSLNATIVH PREVFNRAIR
ASACGVILVH NHPSGDPEPS QDDIKLTNRL VAAGDLLGIP IMDHVIIGHQ KFYSFSRENH
L