Gene Nther_0478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0478 
Symbol 
ID6314780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp508990 
End bp509955 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content40% 
IMG OID642642862 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001916662 
Protein GI188585117 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGAACTT ATATAGTTAG GCGAGTACTG ATAATGATCC CTGTGTTACT AGGAATTACT 
GTCTTTCTCT TTAGCTTGTT TCAATTAGCA CCTGGAAATC CCTTGGCTAG TTTACATCAA
GACCCGGATA TGACACCAGA AGCTCGAGAG CGTATTGAAG AACAATACGG ATTAAATCAA
CCCGTACATA TACAGTACTT AGATTATATG GGAAATCTAT TCCAAGGCGA TATGGGTATG
TCGTTTCAGT ACAGAAGAGA TGTAAGTTTT CTCATAGCTC ATAGAATAGG GCCTACTTTT
ATATTATCAT TTGGTGCATT CTTATTAGCT CTAGTAGTAG CCATACCAGC AGGGATTATA
TCGGCTACCC GCCAATATAC CAGTGTTGAT AATGCCTTTA CGGTGTTTGC CTTAATCGGT
GTATCTATTC CTAACTTTTT CTTTGGATTG GTGATGATGC GCGTCTTCGC AGTTGCTCTG
GGGTGGTTCC CCACTGGGGG AATGCAGACC TCTGGAGCGG ACTTTCCCTT TCCGTGGAAT
ATATTAGACG TAGCAAATCA CCTTGTTTTA CCTGCTATTG TATTAGGCCT TAGCAGTGCT
GCACATTTTA TGCGTTACAC CAGATCTAGT ATGCTAGAAG TTATCAGACA GGATTATATT
CGGACTGCCC GTGCTAAAGG TTTAAAAGAA AGAATCGTTA TATACAAACA CGCTCTTAGA
AATGCATTGA TTCCAATTAT CACTTTAATG GGCTTTCAGT TACCCATGCT CTTTTCAGGT
TCACTAGTAG TAGAAATTGT CTTTGGCTGG CCTGGTATGG GAAGGTTGGC TTATAATGCA
GTTATGCAGC GTGACTATCC ACTAATGATG GGAGTAAACT TGTTCCTTGC CATATTTATA
TTACTCGGAA ATCTACTAGC TGATATTGCC TATGCCTTTG TAGATCCCAG AATCAGGTAT
GATTAA
 
Protein sequence
MGTYIVRRVL IMIPVLLGIT VFLFSLFQLA PGNPLASLHQ DPDMTPEARE RIEEQYGLNQ 
PVHIQYLDYM GNLFQGDMGM SFQYRRDVSF LIAHRIGPTF ILSFGAFLLA LVVAIPAGII
SATRQYTSVD NAFTVFALIG VSIPNFFFGL VMMRVFAVAL GWFPTGGMQT SGADFPFPWN
ILDVANHLVL PAIVLGLSSA AHFMRYTRSS MLEVIRQDYI RTARAKGLKE RIVIYKHALR
NALIPIITLM GFQLPMLFSG SLVVEIVFGW PGMGRLAYNA VMQRDYPLMM GVNLFLAIFI
LLGNLLADIA YAFVDPRIRY D