Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_0434 |
Symbol | |
ID | 6314421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | - |
Start bp | 454634 |
End bp | 455782 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 642642818 |
Product | polysaccharide deacetylase |
Protein accession | YP_001916618 |
Protein GI | 188585073 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 78 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAAAA AAACTTTTCA AACCAAGTCA TTTTCAAACT TATTAACAGT AATTTTCTGC TTAAGTATGA TTACAGTACT GGCAATTCCT TTGATAGGAT GTCAGGATGA AGAAACAAAA TCTCCAAAGG AGTCACAAGA AGAAACAACA GAAAAAGATG AAAAATCTGA ATCTGAAGAT AATAAAGAAA AAGATGAATC ACAAACAGAT GAAAACGAGG AGAACCCTGA AGAAACCATA GACTTTCAAG AGGTTCAACC CAATGAACTG GGAGATGTGA TGATTTTAAT GTATCATCAA ATTGGTGATG AAGAAGACAC CTGGCAAAGA ACTCGCGAAA ATTTCAGAGA AGACCTGGAA CGTTTATACG AAAAAGATTA TCGACTGGTA AACTTAATGG ATGTTGTTAA CGGAAATATT GATCTGCCAC CGGGAAAAAC TCCGGTAGTA TTAACATTTG ACGATGCTTC AAAGGGACAA TTTGGTTATA TTGAGGAGGA TGGTGAAAAA ACCATCGACC CTGATACAGC TGTTGGAATT ATCCTAGAAA TGAAAGAAAA ATACGATGAT TTTACTATAG GAGGTACCTT TTACGTCAAT TATATACCTG TCCCTTTCAG GGACAAGGAA TTATACGAAG AAAAAATAGC TCATCTGGAT GAGCTAGGAT TTGAAATCGG AAACCATGGA TATAATCATC TAAATCTTAA AGATTTAGAT GCCCAGGAAA TTCAAGAAGA ATTGGGACGA CCCCATAAAA TTACCGAAAA TATTATACCT GAATACCAGT TAGAAAGTTT AGCCTTGGCC TTCGGAGCTT GGCCTGGTCA AGATGATCTA AAAGAATTTG TATACTCAGG TGAATACGAA GATATTGAAT ACGAACATAA TGCGGTTTTA AATGTCGGGG CAGAGCCAGC TAACTCCCCT TTCCATAAGG ATTTTGATCC CCTGGATTTA CCCAGGGTCA GGGCAGATCA AAAGCGCATG GACCAATGGT TATCATACTA TGAAAACAAC CCGGAAAAAA GATATGTGAG TGATGGCAAT CCCGATACTA TTACTATTCC TCAAGAACTG AAAGAAGAGT TAAATACGGA TTTTAAAGAT CACAAAGAAC TAGAGATCCA AACTTATACT GTAGACTGA
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Protein sequence | MTKKTFQTKS FSNLLTVIFC LSMITVLAIP LIGCQDEETK SPKESQEETT EKDEKSESED NKEKDESQTD ENEENPEETI DFQEVQPNEL GDVMILMYHQ IGDEEDTWQR TRENFREDLE RLYEKDYRLV NLMDVVNGNI DLPPGKTPVV LTFDDASKGQ FGYIEEDGEK TIDPDTAVGI ILEMKEKYDD FTIGGTFYVN YIPVPFRDKE LYEEKIAHLD ELGFEIGNHG YNHLNLKDLD AQEIQEELGR PHKITENIIP EYQLESLALA FGAWPGQDDL KEFVYSGEYE DIEYEHNAVL NVGAEPANSP FHKDFDPLDL PRVRADQKRM DQWLSYYENN PEKRYVSDGN PDTITIPQEL KEELNTDFKD HKELEIQTYT VD
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