Gene Nther_0405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0405 
Symbol 
ID6316238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp422229 
End bp423467 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content33% 
IMG OID642642789 
Productglycosyl transferase group 1 
Protein accessionYP_001916589 
Protein GI188585044 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.224241 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTAT GTTTTTTTGT TTTCAGGGAA ATAATACATA TAGGTCGTGA CAAACGTGAT 
AATTTAAAAG AACTAAAACA ATTATGTATA AAGGGTGTTC AGAAAAATAT GAAGGTATTG
CAAGTGTATC GCCCAGTTGA AGGTGGAATA AAAAGACATT TAGAAATTTT AGATCAGAAT
TTACCAAATC ACAATATAAT CCCTGTATTT TGTGGTCCTC AAGACGATAT GAATAGTTTG
AATATATCAG ATAATTATCA GCTTGAAATT ACCGATGGTT TGAATATACA AGTACTGGCT
AATAATGTAT ATAGATTAAG GAACATTGTT TCCAAAGTCA AGCCAGATAT TATTCATTCC
CATGGATACA AAGCATCGGC TGTTGTCTAT GGTCTTTCTC CCTTTTTAAG AATTCCATGG
ATCAGTACTT TACATGGATA CAAAACCTGG GGAAGAAATA TCACAACCAA AAGAACTGTA
TTTGATTTGA TGTCAAAACA GGTACTGCAG CGGCCTCAAA AAGTTTTGTG CGTATCTAAA
GCACTGCAAA AAGAACTGCA TTCCATAGGT ATGGAAGAGG ATAAATGTAA AGTTGTCTAT
AATGGAATTC CCATTTCTCA GTATCATCAA AATGTTGATG ACATTTTTGG TGGCAATTAT
CACAGGCCCA ACAGTAAATT AATTACCTAT ATCGGTAGGA TGATGCCGGA TAAAGGTTTA
GATACTTTTT TAACTGCTAT AAAAATATTA GTTGATAAAT ACAAATCATA TATTGATTCT
ATGAATTTAC AATTTGTAAT AGCTGGTGAT GGCCCCTGGA GAAATTATTA TGAGCAGATG
TCTTGGGAAT GGAAAATCGC ACCTTATATA ACTTTTTTAG GTTATCGCAA AGATATATCA
AATATTTTAA AACAATCCTA TGCTCTCTGT ATTCCATCCA GGTATGAGGG CCAGTCAATT
ACAGCAGTAG AGGCCATGGC GTCATTTTGT CCTGTCATAG CTAGCAGAAC TGGGGGGTTA
CAAGAAATAC TGTCTCATGG TGAAACGGGC TTGTTAATTC GTCGAAATGA CCCGCTAGAA
CTAGCTCAAA AAATTATTTT AATATTGAAA AATAAACATC TTAGAAGGCA ATTAATTTTT
AAAGCTTATT ACAAAGCGTT GAAAAACTTT AGTGACAAAA AGATGACTTC AGAAATAGTT
GAAACATACA ATGAGGTGGC TAAAAATGTT AGGGTTTAA
 
Protein sequence
MALCFFVFRE IIHIGRDKRD NLKELKQLCI KGVQKNMKVL QVYRPVEGGI KRHLEILDQN 
LPNHNIIPVF CGPQDDMNSL NISDNYQLEI TDGLNIQVLA NNVYRLRNIV SKVKPDIIHS
HGYKASAVVY GLSPFLRIPW ISTLHGYKTW GRNITTKRTV FDLMSKQVLQ RPQKVLCVSK
ALQKELHSIG MEEDKCKVVY NGIPISQYHQ NVDDIFGGNY HRPNSKLITY IGRMMPDKGL
DTFLTAIKIL VDKYKSYIDS MNLQFVIAGD GPWRNYYEQM SWEWKIAPYI TFLGYRKDIS
NILKQSYALC IPSRYEGQSI TAVEAMASFC PVIASRTGGL QEILSHGETG LLIRRNDPLE
LAQKIILILK NKHLRRQLIF KAYYKALKNF SDKKMTSEIV ETYNEVAKNV RV